Detailed information NTG0494683

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM16_RS28115
• Genome accession: NZ_CP074885
• Coordinates: 5466918..5467901 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2010C_3902
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5461918..5472901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM16_RS28085 (KIM16_27710)	-	5462584..5462691 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM16_RS28090 (KIM16_27715)	-	5463067..5463174 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM16_RS28095 (KIM16_27720)	-	5463550..5463657 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM16_RS28100 (KIM16_27725)	-	5464033..5464140 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM16_RS28105 (KIM16_27730)	yhjV	5464616..5465887 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM16_RS28110 (KIM16_27735)	dppF	5465917..5466921 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM16_RS28115 (KIM16_27740)	amiE	5466918..5467901 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM16_RS28120 (KIM16_27745)	dppC	5467912..5468814 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM16_RS28125 (KIM16_27750)	dppB	5468824..5469843 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM16_RS28130 (KIM16_27755)	dppA	5469994..5471601 (-)	1608	WP_001222868.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM16_RS28135	-	5471953..5472453 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=494683 KIM16_RS28115 WP_001196495.1 5466918..5467901(-) (amiE) [Escherichia coli strain 2010C_3902]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=494683 KIM16_RS28115 WP_001196495.1 5466918..5467901(-) (amiE) [Escherichia coli strain 2010C_3902]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401