Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   INQ56_RS05630 Genome accession   NZ_CP063360
Coordinates   1126091..1127056 (+) Length   321 a.a.
NCBI ID   WP_193804220.1    Uniprot ID   -
Organism   Bacillus altitudinis strain BIM B-263     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1121091..1132056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ56_RS05600 (INQ56_05600) argF 1121414..1122364 (+) 951 WP_024720054.1 ornithine carbamoyltransferase -
  INQ56_RS05605 (INQ56_05605) - 1122468..1122647 (+) 180 WP_008348517.1 YjzC family protein -
  INQ56_RS05610 (INQ56_05610) - 1122817..1124082 (+) 1266 WP_065460140.1 MFS transporter -
  INQ56_RS05615 (INQ56_05615) - 1124202..1124396 (-) 195 WP_008348514.1 YjzD family protein -
  INQ56_RS05620 (INQ56_05620) - 1124609..1125349 (+) 741 WP_193804218.1 hypothetical protein -
  INQ56_RS05625 (INQ56_05625) - 1125425..1126000 (+) 576 WP_193804219.1 nad binding enzyme -
  INQ56_RS05630 (INQ56_05630) med 1126091..1127056 (+) 966 WP_193804220.1 BMP family ABC transporter substrate-binding protein Regulator
  INQ56_RS05635 (INQ56_05635) comZ 1127068..1127265 (+) 198 WP_008348507.1 ComZ family protein Regulator
  INQ56_RS05640 (INQ56_05640) - 1127277..1127510 (-) 234 WP_116306712.1 hypothetical protein -
  INQ56_RS05645 (INQ56_05645) - 1127680..1128618 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  INQ56_RS05650 (INQ56_05650) fabF 1128640..1129881 (+) 1242 WP_116306714.1 beta-ketoacyl-ACP synthase II -
  INQ56_RS05655 (INQ56_05655) - 1129959..1130753 (+) 795 WP_041507466.1 DUF2268 domain-containing protein -
  INQ56_RS05660 (INQ56_05660) - 1130924..1131904 (+) 981 WP_056407962.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35917.94 Da        Isoelectric Point: 6.1733

>NTDB_id=494678 INQ56_RS05630 WP_193804220.1 1126091..1127056(+) (med) [Bacillus altitudinis strain BIM B-263]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYRKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=494678 INQ56_RS05630 WP_193804220.1 1126091..1127056(+) (med) [Bacillus altitudinis strain BIM B-263]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATTGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCCGTGAACCTCTATCGAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.331

97.819

0.629