Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   INQ56_RS05250 Genome accession   NZ_CP063360
Coordinates   1045267..1046217 (+) Length   316 a.a.
NCBI ID   WP_045034718.1    Uniprot ID   -
Organism   Bacillus altitudinis strain BIM B-263     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1040267..1051217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ56_RS05230 (INQ56_05230) - 1041506..1041988 (+) 483 WP_008348662.1 hypothetical protein -
  INQ56_RS05235 (INQ56_05235) - 1042019..1043458 (-) 1440 WP_061418607.1 PLP-dependent aminotransferase family protein -
  INQ56_RS05240 (INQ56_05240) - 1043601..1044770 (+) 1170 WP_045034720.1 MFS transporter -
  INQ56_RS05245 (INQ56_05245) - 1044833..1045111 (+) 279 WP_163116409.1 barstar family protein -
  INQ56_RS05250 (INQ56_05250) ceuB 1045267..1046217 (+) 951 WP_045034718.1 ABC transporter permease Machinery gene
  INQ56_RS05255 (INQ56_05255) - 1046210..1047160 (+) 951 WP_045034717.1 iron chelate uptake ABC transporter family permease subunit -
  INQ56_RS05260 (INQ56_05260) - 1047151..1047909 (+) 759 WP_100325414.1 ABC transporter ATP-binding protein -
  INQ56_RS05265 (INQ56_05265) - 1047932..1048876 (+) 945 WP_113767254.1 siderophore ABC transporter substrate-binding protein -
  INQ56_RS05270 (INQ56_05270) - 1049016..1049972 (+) 957 WP_007499147.1 LCP family protein -
  INQ56_RS05275 (INQ56_05275) - 1050205..1050639 (-) 435 WP_039167431.1 hypothetical protein -
  INQ56_RS05280 (INQ56_05280) - 1050725..1051087 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34977.34 Da        Isoelectric Point: 9.7475

>NTDB_id=494675 INQ56_RS05250 WP_045034718.1 1045267..1046217(+) (ceuB) [Bacillus altitudinis strain BIM B-263]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDMLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=494675 INQ56_RS05250 WP_045034718.1 1045267..1046217(+) (ceuB) [Bacillus altitudinis strain BIM B-263]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTTTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCTTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGAGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTTGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGTGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACATGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTTG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494