Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   INQ56_RS04220 Genome accession   NZ_CP063360
Coordinates   854464..855255 (+) Length   263 a.a.
NCBI ID   WP_017358838.1    Uniprot ID   A0A5K1NDE0
Organism   Bacillus altitudinis strain BIM B-263     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 849464..860255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INQ56_RS04195 (INQ56_04195) - 850903..851490 (+) 588 WP_024720283.1 nitroreductase -
  INQ56_RS04200 (INQ56_04200) - 851616..852968 (+) 1353 WP_048002895.1 IS1182 family transposase -
  INQ56_RS04205 (INQ56_04205) - 853092..853247 (-) 156 WP_008341997.1 YfhD family protein -
  INQ56_RS04210 (INQ56_04210) - 853309..853419 (-) 111 WP_017358836.1 YfhE family protein -
  INQ56_RS04215 (INQ56_04215) - 853472..854368 (-) 897 WP_193804183.1 TIGR01777 family oxidoreductase -
  INQ56_RS04220 (INQ56_04220) recX 854464..855255 (+) 792 WP_017358838.1 recombination regulator RecX Regulator
  INQ56_RS04225 (INQ56_04225) - 855259..855573 (+) 315 WP_045034501.1 YfhH family protein -
  INQ56_RS04230 (INQ56_04230) - 855597..855770 (-) 174 WP_003217811.1 YpzG family protein -
  INQ56_RS04235 (INQ56_04235) - 855796..855945 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  INQ56_RS04240 (INQ56_04240) - 856062..856334 (+) 273 WP_017366871.1 YfhJ family protein -
  INQ56_RS04245 (INQ56_04245) - 856636..857619 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=494670 INQ56_RS04220 WP_017358838.1 854464..855255(+) (recX) [Bacillus altitudinis strain BIM B-263]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=494670 INQ56_RS04220 WP_017358838.1 854464..855255(+) (recX) [Bacillus altitudinis strain BIM B-263]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGATGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGTTATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NDE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635