Detailed information NTG0494659

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: IM687_RS19935
• Genome accession: NZ_CP063358
• Coordinates: 4233666..4234934 (-)
• Length: 422 a.a.
• NCBI ID: WP_196111677.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain ZDHY95
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4228666..4239934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IM687_RS19920 (IM687_19920)	rpoH	4231016..4231870 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
IM687_RS19925 (IM687_19925)	ftsX	4231982..4233001 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
IM687_RS19930 (IM687_19930)	ftsE	4233001..4233669 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
IM687_RS19935 (IM687_19935)	pilA	4233666..4234934 (-)	1269	WP_196111677.1	signal recognition particle-docking protein FtsY	Machinery gene
IM687_RS19940 (IM687_19940)	-	4235162..4236514 (+)	1353	WP_049340272.1	M16 family metallopeptidase	-
IM687_RS19945 (IM687_19945)	-	4236507..4238048 (+)	1542	WP_196111678.1	M16 family metallopeptidase	-
IM687_RS19950 (IM687_19950)	rsmD	4238048..4238665 (+)	618	WP_020305641.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
IM687_RS19955 (IM687_19955)	-	4238659..4239063 (-)	405	WP_026006467.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 44963.17 Da
• Isoelectric Point: 4.6893

>NTDB_id=494659 IM687_RS19935 WP_196111677.1 4233666..4234934(-) (pilA) [Stutzerimonas stutzeri strain ZDHY95]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPHAVEADLQPTEVIE
SPLLDPVPEPEPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLLTA
DVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIGKLAKKL
QLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEEL
KKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGI
DDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1269 bp

>NTDB_id=494659 IM687_RS19935 WP_196111677.1 4233666..4234934(-) (pilA) [Stutzerimonas stutzeri strain ZDHY95]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCCGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCACGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCTAGACCCTGTACCCGAACCCGAACCCGAACCCGAACCCGAGCCGGTATCTGCCCCGGTCGTTGCGGCCAC
GTCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATCGGCGAAG
GCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGATGAACTGGAAACCCGCCTGCTGACCGCC
GACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGACAGCGG
CGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATGCCGGCA
AGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGAAACTG
CAACTCGACGGCAAGAAAGTCATGCTCGCCGCCGGTGACACCTTTCGCGCCGCAGCGGTGGAGCAGCTGCAGGTGTGGGG
CGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGCAGGCCG
CCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAAGAGCTG
AAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGGTACCGG
ACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCGACGGCA
CCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAAGGTATC
GACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.761	99.052	0.493