Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   AWH56_RS14840 Genome accession   NZ_CP063356
Coordinates   2923929..2924693 (+) Length   254 a.a.
NCBI ID   WP_071315762.1    Uniprot ID   A0A1S2MEQ2
Organism   Anaerobacillus isosaccharinicus strain NB2006     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2918929..2929693
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWH56_RS14820 (AWH56_014820) - 2919158..2920489 (+) 1332 WP_071315759.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  AWH56_RS14825 (AWH56_014825) - 2920522..2921787 (+) 1266 WP_071315760.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  AWH56_RS14830 (AWH56_014830) - 2921880..2923049 (+) 1170 WP_083388429.1 CapA family protein -
  AWH56_RS14835 (AWH56_014835) - 2923239..2923526 (+) 288 WP_071315761.1 hypothetical protein -
  AWH56_RS14840 (AWH56_014840) comC 2923929..2924693 (+) 765 WP_071315762.1 prepilin peptidase Machinery gene
  AWH56_RS14845 (AWH56_014845) - 2924819..2924974 (+) 156 WP_159432450.1 hypothetical protein -
  AWH56_RS14850 (AWH56_014850) - 2925187..2926548 (-) 1362 WP_071315670.1 transposase -
  AWH56_RS14855 (AWH56_014855) - 2926795..2927898 (+) 1104 WP_071316131.1 hypothetical protein -
  AWH56_RS14860 (AWH56_014860) aspA 2928153..2929571 (+) 1419 WP_071316130.1 aspartate ammonia-lyase -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28305.18 Da        Isoelectric Point: 9.7100

>NTDB_id=494594 AWH56_RS14840 WP_071315762.1 2923929..2924693(+) (comC) [Anaerobacillus isosaccharinicus strain NB2006]
MLIIRLVYLYTFTLGLILGSFYNVVGLRVPNNQSITRPRSHCTKCKRTLAALELVPVFSYLIQKGKCKGCGTKISAIYPT
IEATTGLLFVYAFYHFGFSWETIVAFVFISLLVIIFVSDIHYMIIPDKVLLFFAPILLLMRYTLAPIDPWWDPLLGAVIG
FSLLLAIAIISNGGMGGGDIKLFAVIGIVLGWKGVLLAFFFSTLLGAVIGIIGLRLGKMRRGEPIPFGPYIVAGTLLTYF
FENPILAWYWNLFL

Nucleotide


Download         Length: 765 bp        

>NTDB_id=494594 AWH56_RS14840 WP_071315762.1 2923929..2924693(+) (comC) [Anaerobacillus isosaccharinicus strain NB2006]
ATGTTAATTATAAGGCTTGTTTATCTTTACACATTCACCCTTGGTCTCATCCTAGGGTCTTTTTACAACGTCGTTGGTTT
GCGGGTGCCCAATAATCAATCGATTACTCGGCCGCGCTCCCATTGTACAAAGTGCAAACGAACGTTAGCAGCTTTGGAAC
TAGTTCCAGTTTTTTCGTACCTCATCCAAAAGGGGAAATGCAAAGGCTGTGGGACGAAGATTTCGGCTATTTATCCGACT
ATAGAGGCTACAACTGGACTCTTATTTGTCTATGCTTTCTATCACTTTGGGTTCTCATGGGAAACGATTGTTGCCTTTGT
TTTTATATCATTGCTTGTTATCATTTTTGTATCGGACATTCACTACATGATCATTCCTGATAAAGTCTTACTTTTCTTTG
CGCCAATTCTTTTACTAATGCGCTATACTCTCGCTCCTATCGATCCTTGGTGGGATCCATTACTAGGTGCTGTGATTGGT
TTTTCTTTGCTTCTAGCAATTGCAATTATTAGTAACGGTGGTATGGGTGGTGGGGATATTAAGTTATTTGCGGTGATCGG
GATTGTTCTTGGCTGGAAAGGAGTTTTACTAGCATTTTTTTTCTCTACACTCCTAGGAGCGGTTATTGGTATAATAGGTT
TAAGGCTCGGAAAAATGAGACGAGGAGAGCCAATTCCGTTTGGTCCATACATTGTAGCCGGAACTCTCCTAACCTACTTT
TTTGAAAATCCGATTTTAGCATGGTACTGGAACCTATTTTTATAA

Domains

Predicted by InterproScan.

Type IV leader peptidase family (Peptidase_A24)

(107-211)

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(14-96)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S2MEQ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

50.206

95.669

0.48