Detailed information NTG0494522

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM17_RS26500
• Genome accession: NZ_CP074876
• Coordinates: 5230535..5231518 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2011C_3361
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5225535..5236518

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM17_RS26470 (KIM17_26175)	-	5226199..5226306 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM17_RS26475 (KIM17_26180)	-	5226682..5226789 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM17_RS26480 (KIM17_26185)	-	5227167..5227274 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM17_RS26485 (KIM17_26190)	-	5227650..5227757 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM17_RS26490 (KIM17_26195)	yhjV	5228233..5229504 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM17_RS26495 (KIM17_26200)	dppF	5229534..5230538 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM17_RS26500 (KIM17_26205)	amiE	5230535..5231518 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM17_RS26505 (KIM17_26210)	dppC	5231529..5232431 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM17_RS26510 (KIM17_26215)	dppB	5232441..5233460 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM17_RS26515 (KIM17_26220)	dppA	5233611..5235218 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM17_RS26520	-	5235570..5236070 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=494522 KIM17_RS26500 WP_001196495.1 5230535..5231518(-) (amiE) [Escherichia coli strain 2011C_3361]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=494522 KIM17_RS26500 WP_001196495.1 5230535..5231518(-) (amiE) [Escherichia coli strain 2011C_3361]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401