Detailed information NTG0494443

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM18_RS26280
• Genome accession: NZ_CP074874
• Coordinates: 5200056..5201039 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2011C_4037
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5195056..5206039

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM18_RS26250 (KIM18_25970)	-	5195720..5195827 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM18_RS26255 (KIM18_25975)	-	5196203..5196310 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM18_RS26260 (KIM18_25980)	-	5196688..5196795 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM18_RS26265 (KIM18_25985)	-	5197171..5197278 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM18_RS26270 (KIM18_25990)	yhjV	5197754..5199025 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM18_RS26275 (KIM18_25995)	dppF	5199055..5200059 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM18_RS26280 (KIM18_26000)	amiE	5200056..5201039 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM18_RS26285 (KIM18_26005)	dppC	5201050..5201952 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM18_RS26290 (KIM18_26010)	dppB	5201962..5202981 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM18_RS26295 (KIM18_26015)	dppA	5203132..5204739 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM18_RS26300	-	5205091..5205591 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=494443 KIM18_RS26280 WP_001196495.1 5200056..5201039(-) (amiE) [Escherichia coli strain 2011C_4037]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=494443 KIM18_RS26280 WP_001196495.1 5200056..5201039(-) (amiE) [Escherichia coli strain 2011C_4037]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401