Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | INP51_RS08890 | Genome accession | NZ_CP063304 |
| Coordinates | 1946565..1947926 (-) | Length | 453 a.a. |
| NCBI ID | WP_193734525.1 | Uniprot ID | A0A7M2RCX4 |
| Organism | Blautia liquoris strain LZLJ-3 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1941565..1952926
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INP51_RS08890 (INP51_08890) | radA | 1946565..1947926 (-) | 1362 | WP_193734525.1 | DNA repair protein RadA | Machinery gene |
| INP51_RS08895 (INP51_08895) | - | 1948020..1948439 (-) | 420 | WP_193734526.1 | endosialidase | - |
| INP51_RS08900 (INP51_08900) | - | 1948667..1949575 (-) | 909 | WP_193734527.1 | DegV family protein | - |
| INP51_RS08905 (INP51_08905) | - | 1949616..1952063 (-) | 2448 | WP_193734528.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| INP51_RS08910 (INP51_08910) | - | 1952088..1952852 (-) | 765 | WP_193734529.1 | type III pantothenate kinase | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 49318.05 Da Isoelectric Point: 8.3645
>NTDB_id=494361 INP51_RS08890 WP_193734525.1 1946565..1947926(-) (radA) [Blautia liquoris strain LZLJ-3]
MAKGSKSVFFCQSCGYESTKWMGQCPGCGEWNTFVEEIIDTKKPAGARRTKTDAKPVKLSEINMSGERRITTNIEELDRV
LGGGVVPGSLTLVGGDPGIGKSTLLLQVCRNLSLNGKKVLYISGEESLSQIKLRAVRIGDFNGNLELLCETNLGVIHEVI
KRQKPDIAVIDSIQTMYNEEVSSSPGSVSQVRESTAVLMQIAKGLGISIFIVGHVTKDGNVAGPRVLEHMVDTVLYFEGE
RHASYRILRGVKNRFGSTNEIGVFEMQHNGLMEVKNPSEYMLEGKPEGASGSIVTCSMEGTRPILIEIQALVAPSNFGIP
RRTTAGTDFNRVNLLMAVLEKRAHLNLSASDAYVNIAGGIKMNEPAIDLGILLAIVSSYRDIVISDKVVAFGEVGLSGEV
RAVNMADQRVREVKKLGFETVILPAVSMRSIKRESQMKFVPVKNISDAIRFIV
MAKGSKSVFFCQSCGYESTKWMGQCPGCGEWNTFVEEIIDTKKPAGARRTKTDAKPVKLSEINMSGERRITTNIEELDRV
LGGGVVPGSLTLVGGDPGIGKSTLLLQVCRNLSLNGKKVLYISGEESLSQIKLRAVRIGDFNGNLELLCETNLGVIHEVI
KRQKPDIAVIDSIQTMYNEEVSSSPGSVSQVRESTAVLMQIAKGLGISIFIVGHVTKDGNVAGPRVLEHMVDTVLYFEGE
RHASYRILRGVKNRFGSTNEIGVFEMQHNGLMEVKNPSEYMLEGKPEGASGSIVTCSMEGTRPILIEIQALVAPSNFGIP
RRTTAGTDFNRVNLLMAVLEKRAHLNLSASDAYVNIAGGIKMNEPAIDLGILLAIVSSYRDIVISDKVVAFGEVGLSGEV
RAVNMADQRVREVKKLGFETVILPAVSMRSIKRESQMKFVPVKNISDAIRFIV
Nucleotide
Download Length: 1362 bp
>NTDB_id=494361 INP51_RS08890 WP_193734525.1 1946565..1947926(-) (radA) [Blautia liquoris strain LZLJ-3]
ATGGCTAAGGGATCGAAATCAGTTTTTTTCTGTCAGAGTTGCGGATATGAATCTACAAAATGGATGGGACAGTGTCCGGG
ATGCGGAGAATGGAATACCTTTGTCGAAGAGATCATCGATACAAAAAAGCCGGCAGGAGCACGAAGAACAAAAACTGATG
CAAAACCGGTAAAACTATCAGAGATCAATATGTCCGGCGAACGTAGAATAACCACGAATATAGAAGAATTAGACAGGGTT
CTCGGTGGAGGAGTTGTTCCAGGTTCTCTGACTCTGGTTGGAGGAGACCCAGGAATTGGGAAATCGACCCTTTTGCTTCA
GGTCTGTAGAAATCTGTCATTAAACGGAAAGAAAGTTCTTTATATATCCGGTGAAGAATCTTTAAGCCAGATTAAGCTTC
GGGCAGTCAGAATCGGGGATTTTAATGGAAATTTAGAACTTCTCTGTGAGACGAACCTCGGGGTGATCCATGAGGTTATA
AAGAGGCAAAAACCTGACATTGCTGTGATAGATTCTATCCAGACAATGTACAATGAAGAAGTGAGTTCCTCCCCGGGCAG
TGTATCTCAGGTGAGGGAGTCGACCGCTGTTTTGATGCAGATTGCGAAGGGACTTGGAATATCAATCTTTATTGTCGGGC
ATGTTACGAAAGATGGTAATGTTGCCGGTCCCAGAGTATTGGAACATATGGTTGACACGGTGCTCTATTTTGAGGGGGAG
AGACATGCTTCCTATCGAATCTTAAGAGGAGTCAAGAACCGCTTCGGATCAACGAATGAAATCGGTGTCTTTGAAATGCA
GCATAATGGGTTAATGGAGGTGAAAAATCCTTCGGAATATATGCTCGAAGGTAAACCAGAGGGAGCATCGGGATCTATTG
TCACATGCTCAATGGAAGGCACAAGACCAATCTTGATTGAGATACAGGCCCTGGTGGCGCCGAGCAACTTTGGAATTCCG
CGCAGAACAACAGCCGGAACCGATTTTAACAGGGTTAATCTTCTGATGGCTGTGCTTGAAAAAAGAGCACATCTGAATCT
GTCTGCCAGCGATGCGTATGTCAATATAGCCGGTGGGATTAAGATGAATGAACCTGCGATTGATCTGGGGATACTCCTTG
CTATTGTATCCAGTTATCGTGATATTGTCATCAGTGACAAAGTTGTGGCTTTTGGTGAAGTAGGATTAAGCGGAGAAGTA
CGGGCAGTGAATATGGCGGATCAGCGAGTTCGGGAAGTGAAAAAATTGGGATTCGAGACTGTGATACTTCCTGCTGTGAG
CATGAGATCAATCAAAAGAGAGAGCCAGATGAAATTTGTTCCAGTTAAGAACATTAGTGACGCAATTCGCTTTATAGTTT
AA
ATGGCTAAGGGATCGAAATCAGTTTTTTTCTGTCAGAGTTGCGGATATGAATCTACAAAATGGATGGGACAGTGTCCGGG
ATGCGGAGAATGGAATACCTTTGTCGAAGAGATCATCGATACAAAAAAGCCGGCAGGAGCACGAAGAACAAAAACTGATG
CAAAACCGGTAAAACTATCAGAGATCAATATGTCCGGCGAACGTAGAATAACCACGAATATAGAAGAATTAGACAGGGTT
CTCGGTGGAGGAGTTGTTCCAGGTTCTCTGACTCTGGTTGGAGGAGACCCAGGAATTGGGAAATCGACCCTTTTGCTTCA
GGTCTGTAGAAATCTGTCATTAAACGGAAAGAAAGTTCTTTATATATCCGGTGAAGAATCTTTAAGCCAGATTAAGCTTC
GGGCAGTCAGAATCGGGGATTTTAATGGAAATTTAGAACTTCTCTGTGAGACGAACCTCGGGGTGATCCATGAGGTTATA
AAGAGGCAAAAACCTGACATTGCTGTGATAGATTCTATCCAGACAATGTACAATGAAGAAGTGAGTTCCTCCCCGGGCAG
TGTATCTCAGGTGAGGGAGTCGACCGCTGTTTTGATGCAGATTGCGAAGGGACTTGGAATATCAATCTTTATTGTCGGGC
ATGTTACGAAAGATGGTAATGTTGCCGGTCCCAGAGTATTGGAACATATGGTTGACACGGTGCTCTATTTTGAGGGGGAG
AGACATGCTTCCTATCGAATCTTAAGAGGAGTCAAGAACCGCTTCGGATCAACGAATGAAATCGGTGTCTTTGAAATGCA
GCATAATGGGTTAATGGAGGTGAAAAATCCTTCGGAATATATGCTCGAAGGTAAACCAGAGGGAGCATCGGGATCTATTG
TCACATGCTCAATGGAAGGCACAAGACCAATCTTGATTGAGATACAGGCCCTGGTGGCGCCGAGCAACTTTGGAATTCCG
CGCAGAACAACAGCCGGAACCGATTTTAACAGGGTTAATCTTCTGATGGCTGTGCTTGAAAAAAGAGCACATCTGAATCT
GTCTGCCAGCGATGCGTATGTCAATATAGCCGGTGGGATTAAGATGAATGAACCTGCGATTGATCTGGGGATACTCCTTG
CTATTGTATCCAGTTATCGTGATATTGTCATCAGTGACAAAGTTGTGGCTTTTGGTGAAGTAGGATTAAGCGGAGAAGTA
CGGGCAGTGAATATGGCGGATCAGCGAGTTCGGGAAGTGAAAAAATTGGGATTCGAGACTGTGATACTTCCTGCTGTGAG
CATGAGATCAATCAAAAGAGAGAGCCAGATGAAATTTGTTCCAGTTAAGAACATTAGTGACGCAATTCGCTTTATAGTTT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
58.022 |
100 |
0.583 |
| radA | Streptococcus mitis NCTC 12261 |
55.654 |
99.558 |
0.554 |
| radA | Streptococcus pneumoniae Rx1 |
55.654 |
99.558 |
0.554 |
| radA | Streptococcus pneumoniae D39 |
55.654 |
99.558 |
0.554 |
| radA | Streptococcus pneumoniae R6 |
55.654 |
99.558 |
0.554 |
| radA | Streptococcus pneumoniae TIGR4 |
55.654 |
99.558 |
0.554 |
| radA | Streptococcus mitis SK321 |
55.654 |
99.558 |
0.554 |