Detailed information NTG0494288

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM20_RS26330
• Genome accession: NZ_CP074868
• Coordinates: 5206801..5207784 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2013C_3277
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5201801..5212784

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM20_RS26300 (KIM20_26010)	-	5202465..5202572 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM20_RS26305 (KIM20_26015)	-	5202948..5203055 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM20_RS26310 (KIM20_26020)	-	5203433..5203540 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM20_RS26315 (KIM20_26025)	-	5203916..5204023 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM20_RS26320 (KIM20_26030)	yhjV	5204499..5205770 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM20_RS26325 (KIM20_26035)	dppF	5205800..5206804 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM20_RS26330 (KIM20_26040)	amiE	5206801..5207784 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM20_RS26335 (KIM20_26045)	dppC	5207795..5208697 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM20_RS26340 (KIM20_26050)	dppB	5208707..5209726 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM20_RS26345 (KIM20_26055)	dppA	5209877..5211484 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM20_RS26350	-	5211836..5212336 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=494288 KIM20_RS26330 WP_001196495.1 5206801..5207784(-) (amiE) [Escherichia coli strain 2013C_3277]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=494288 KIM20_RS26330 WP_001196495.1 5206801..5207784(-) (amiE) [Escherichia coli strain 2013C_3277]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401