Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   IM723_RS07785 Genome accession   NZ_CP063275
Coordinates   1509599..1510330 (-) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain DMST-H2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1504599..1515330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM723_RS07760 - 1505663..1506844 (+) 1182 WP_173940628.1 NAD(P)/FAD-dependent oxidoreductase -
  IM723_RS07770 trmB 1507064..1507705 (-) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  IM723_RS07775 - 1507715..1508506 (-) 792 WP_002951667.1 phosphotransferase family protein -
  IM723_RS07780 pptB 1508568..1509602 (-) 1035 WP_173940629.1 ABC transporter permease Regulator
  IM723_RS07785 pptA 1509599..1510330 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  IM723_RS07790 - 1510395..1510814 (+) 420 WP_002891660.1 HIT family protein -
  IM723_RS07795 - 1510811..1511110 (+) 300 WP_173940630.1 hypothetical protein -
  IM723_RS10090 - 1511672..1511893 (-) 222 WP_002947520.1 hypothetical protein -
  IM723_RS07805 - 1511912..1512547 (-) 636 WP_022096674.1 DUF4230 domain-containing protein -
  IM723_RS10230 - 1512566..1512691 (-) 126 WP_011681534.1 hypothetical protein -
  IM723_RS07810 - 1512903..1514068 (-) 1166 Protein_1494 IS256-like element IS1191 family transposase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=494179 IM723_RS07785 WP_002951673.1 1509599..1510330(-) (pptA) [Streptococcus thermophilus strain DMST-H2]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=494179 IM723_RS07785 WP_002951673.1 1509599..1510330(-) (pptA) [Streptococcus thermophilus strain DMST-H2]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTAAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971