Detailed information NTG0494052

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM23_RS27110
• Genome accession: NZ_CP074861
• Coordinates: 5312680..5313663 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2013C_3963
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5307680..5318663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM23_RS27080 (KIM23_26785)	-	5308344..5308451 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM23_RS27085 (KIM23_26790)	-	5308827..5308934 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM23_RS27090 (KIM23_26795)	-	5309312..5309419 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM23_RS27095 (KIM23_26800)	-	5309795..5309902 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM23_RS27100 (KIM23_26805)	yhjV	5310378..5311649 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM23_RS27105 (KIM23_26810)	dppF	5311679..5312683 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM23_RS27110 (KIM23_26815)	amiE	5312680..5313663 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM23_RS27115 (KIM23_26820)	dppC	5313674..5314576 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM23_RS27120 (KIM23_26825)	dppB	5314586..5315605 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM23_RS27125 (KIM23_26830)	dppA	5315756..5317363 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM23_RS27130	-	5317715..5318215 (-)	501	WP_000469071.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=494052 KIM23_RS27110 WP_001196495.1 5312680..5313663(-) (amiE) [Escherichia coli strain 2013C_3963]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=494052 KIM23_RS27110 WP_001196495.1 5312680..5313663(-) (amiE) [Escherichia coli strain 2013C_3963]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401