Detailed information NTG0493831

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM25_RS01110
• Genome accession: NZ_CP074856
• Coordinates: 232789..233772 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2013C_3997_C1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 227789..238772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM25_RS01090	-	228237..228737 (+)	501	WP_000469071.1	hypothetical protein	-
KIM25_RS01095 (KIM25_01090)	dppA	229089..230696 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KIM25_RS01100 (KIM25_01095)	dppB	230847..231866 (+)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM25_RS01105 (KIM25_01100)	dppC	231876..232778 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM25_RS01110 (KIM25_01105)	amiE	232789..233772 (+)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM25_RS01115 (KIM25_01110)	dppF	233769..234773 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM25_RS01120 (KIM25_01115)	yhjV	234803..236074 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM25_RS01125 (KIM25_01120)	-	236550..236657 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM25_RS01130 (KIM25_01125)	-	237033..237140 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM25_RS01135 (KIM25_01130)	-	237518..237625 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM25_RS01140 (KIM25_01135)	-	238001..238108 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=493831 KIM25_RS01110 WP_001196495.1 232789..233772(+) (amiE) [Escherichia coli strain 2013C_3997_C1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=493831 KIM25_RS01110 WP_001196495.1 232789..233772(+) (amiE) [Escherichia coli strain 2013C_3997_C1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTAGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401