Detailed information NTG0493816

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: INR79_RS14665
• Genome accession: NZ_CP063199
• Coordinates: 3267280..3270666 (+)
• Length: 1128 a.a.
• NCBI ID: WP_223094845.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43132
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3262280..3275666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INR79_RS14645 (INR79_14645)	erpA	3262514..3262855 (-)	342	WP_004401935.1	iron-sulfur cluster insertion protein ErpA	-
INR79_RS14650 (INR79_14650)	hemL	3263055..3264344 (+)	1290	WP_223094841.1	glutamate-1-semialdehyde 2,1-aminomutase	-
INR79_RS14655 (INR79_14655)	-	3264814..3265932 (+)	1119	WP_410482883.1	AI-2E family transporter	-
INR79_RS14660 (INR79_14660)	rsmC	3266011..3267039 (+)	1029	WP_223094843.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
INR79_RS14665 (INR79_14665)	chiS	3267280..3270666 (+)	3387	WP_223094845.1	ATP-binding protein	Regulator
INR79_RS14670 (INR79_14670)	-	3271411..3273090 (+)	1680	WP_004401929.1	ABC transporter substrate-binding protein	-
INR79_RS14675 (INR79_14675)	-	3273246..3274232 (+)	987	WP_004401928.1	ABC transporter permease	-
INR79_RS14680 (INR79_14680)	-	3274235..3275260 (+)	1026	WP_004401926.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126910.42 Da
• Isoelectric Point: 5.5679

>NTDB_id=493816 INR79_RS14665 WP_223094845.1 3267280..3270666(+) (chiS) [Vibrio sp. SCSIO 43132]
MFKSNKKQKFKRLQHTLMVAFLVLSITPLTLIALFFLQSHSKDLQEQSTSHLLSVRDTKKQQLVDYFDAKESEVMGFVRS
ELAYNSGGRFYGLINAFSNLGETIEQSREYAQQRYIEGSGDQIKTSILPESDDYQGSERYRLMHKRYHRRYVDLLKRSDF
DDILLVDLDGNVVYSLNKHDNYGTNLGSGKYRNSNLGETFQAIKSLVKKQKDTPDITPIVMSDFALEGSEHIAWFAAPII
QQEYLHSYALFRLPSTKLISLFEDTAARKAIKAFLVGSDQQARVFNVTQEEIDKSSEIIDRALNGQTSVKTFINTAGESI
IAAYTSIKIQNIEWALIAERTEAEAFARIQQLEKVFVVAMLIAIILVVICSHYLSNFITSPLLKLTWSAERVSAGDLDEV
MFETRRKDEIGRLAVSFQRMQRSIREKILTIKSQNEELEAHLKVIQSQNDELQLANKLKDEFLATTSHELRTPLHGMVGI
AEALISGANGPIPANQKHQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIQAAAVNLSSSTRLVLELSQHLLGNKSIRII
NQVPMDLPLVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATVLDDKLRVQVVDTGQGIPAEQLEHIFEPLIQAGQDSSR
YRQGAGLGLSISRQLIELMGGTLYVSSQPLVGTTFSFSLPLASDAEISTSKQLGEQNHFQLPEANENSSPEDNSLPENPE
GPLIVVADDEPVNLQILDSFLRMEGYRVKTAKDGTETLELVQQEKPELLLLDVMMPGLSGYQVCEQVRLSYDLSELPVIM
LTALSQTNDRIKGFDSGANDYLTKPFNKLELASRIKAHLSASKAELRRIENDKLQAELKQRALVEANLLETQGRLLEQLE
SAPEAILCLRDDGRIRFANEAASKLFKRTQEQLKRSNGDEVIAPKYLNLSQEHFCGGIDVYIDDRREHLSADVLKLPEGS
DIQYMYIFNVGGGINATRINNLETAVEALSSYAFEGDKGKLQQLKELGGEFTRIADKVSGRGGDKTELMREILVDSMTTA
IDYWESETGQTKFSFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSIEFILDNCHTPGAQRDKLVSLRD
KLQKLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=493816 INR79_RS14665 WP_223094845.1 3267280..3270666(+) (chiS) [Vibrio sp. SCSIO 43132]
ATGTTTAAATCTAATAAAAAACAAAAATTTAAACGTCTTCAGCATACTTTGATGGTGGCATTTCTTGTCCTCAGTATTAC
GCCGCTGACTTTAATTGCTCTCTTCTTTTTGCAGTCTCATAGTAAAGATTTGCAGGAGCAGAGTACTTCTCACCTTCTTT
CAGTTCGAGATACGAAAAAACAACAACTTGTCGATTATTTCGATGCAAAAGAATCCGAAGTAATGGGTTTTGTCCGTTCC
GAACTGGCTTATAACAGTGGTGGTCGTTTTTACGGTCTTATCAATGCTTTCAGCAATTTAGGCGAAACGATTGAACAATC
GCGGGAGTATGCGCAGCAGCGTTACATTGAAGGATCTGGGGATCAGATAAAAACGTCAATTTTACCTGAGTCTGATGATT
ACCAGGGCAGCGAACGTTATCGCTTAATGCACAAGCGTTACCATCGACGTTACGTTGATCTTTTGAAACGCAGTGACTTT
GACGACATCTTGCTGGTCGATCTGGATGGAAACGTCGTTTACTCACTCAACAAGCACGACAATTATGGTACGAATCTGGG
TTCTGGAAAGTATCGGAACAGCAACCTCGGTGAAACTTTTCAGGCAATAAAATCTCTGGTGAAAAAGCAGAAAGACACAC
CAGACATTACGCCAATTGTGATGTCGGATTTTGCACTAGAGGGCAGTGAGCACATCGCGTGGTTTGCCGCGCCCATCATC
CAGCAAGAATACCTGCACAGTTATGCCCTATTCCGTTTGCCTAGCACCAAGCTGATTTCTCTGTTTGAAGATACTGCTGC
GCGTAAAGCTATCAAGGCATTCTTGGTTGGTAGTGACCAACAGGCTCGTGTTTTTAACGTCACTCAAGAAGAAATTGACA
AAAGTAGCGAGATCATCGACCGCGCCCTTAATGGGCAAACCTCAGTCAAAACCTTTATTAATACCGCAGGCGAGAGCATT
ATTGCGGCTTACACCAGTATTAAGATCCAGAATATTGAATGGGCATTGATTGCGGAAAGAACCGAAGCTGAAGCGTTTGC
TCGGATTCAGCAGCTAGAAAAAGTATTCGTGGTGGCCATGTTGATCGCCATTATCCTCGTGGTGATATGCTCCCATTATC
TTTCTAACTTCATTACGTCCCCACTTTTAAAACTGACGTGGTCAGCGGAAAGGGTTTCAGCTGGTGATCTCGACGAAGTG
ATGTTTGAAACACGCCGCAAAGACGAAATTGGTCGTCTGGCGGTCAGTTTCCAGCGAATGCAGCGTTCTATCCGTGAGAA
GATCCTCACCATCAAATCACAAAATGAAGAGCTAGAAGCCCATTTGAAAGTGATTCAAAGCCAGAATGACGAGCTTCAAC
TGGCCAACAAACTGAAAGATGAATTCCTAGCAACTACCTCGCACGAGCTCCGTACACCACTACATGGCATGGTGGGTATT
GCAGAGGCGTTAATCAGCGGAGCGAATGGACCAATACCTGCAAATCAGAAACATCAGCTCGATATCATCATTAATAGTGG
TCAACGTCTTGCAACTCTGGTTGATGATCTTCTGGACTATCACAAAATGCGCTACGGCAGCCTCGATATTCAAGCTGCCG
CCGTTAACCTCTCGTCCTCTACACGCTTGGTACTGGAACTTTCACAGCATTTGCTGGGCAACAAATCGATTCGCATCATT
AATCAGGTTCCGATGGATTTGCCTTTAGTATCCGCTGATCCGCAGCGTTTAGAGCAGGTTCTCTACAACCTGATAGGCAA
TGCAATTAAGTACACCTCTGAGGGTAAAATCGTCATTTCCGCTACAGTGCTGGACGATAAACTCCGGGTTCAGGTGGTTG
ATACAGGTCAGGGTATTCCGGCTGAGCAGCTGGAGCACATTTTTGAGCCTCTCATTCAGGCGGGTCAGGACTCCAGCCGT
TACCGTCAGGGGGCGGGATTAGGCTTATCTATCAGCCGACAGCTGATAGAACTGATGGGAGGAACACTCTATGTCAGCAG
TCAGCCTCTTGTTGGAACTACCTTTAGTTTCTCTTTACCGTTAGCGTCAGATGCAGAGATATCAACGTCGAAGCAGCTTG
GCGAACAGAATCATTTCCAGTTGCCAGAAGCAAATGAAAACTCATCACCAGAAGACAATTCATTGCCAGAAAACCCAGAA
GGTCCACTTATTGTGGTCGCGGATGATGAACCAGTGAACCTGCAAATTCTGGACAGCTTCCTGCGAATGGAAGGATACAG
GGTGAAAACGGCAAAAGATGGCACCGAGACTCTGGAACTGGTTCAGCAGGAAAAGCCAGAACTGCTGTTATTAGACGTGA
TGATGCCAGGATTGAGTGGCTATCAGGTTTGCGAGCAGGTTCGTCTGAGCTATGACTTATCTGAGCTTCCGGTCATTATG
CTCACCGCGCTAAGCCAGACCAACGACCGAATCAAAGGGTTCGACAGCGGGGCGAATGACTATTTAACGAAGCCATTCAA
CAAACTCGAGCTGGCTTCTCGAATCAAAGCTCATCTCTCAGCAAGTAAGGCTGAGCTTCGCCGAATTGAAAACGACAAAC
TTCAGGCAGAGCTTAAGCAAAGAGCACTAGTAGAAGCAAACCTGCTGGAAACACAAGGCAGATTGCTAGAACAGCTTGAA
TCGGCACCTGAAGCCATTCTGTGCCTTAGGGACGATGGCAGAATACGGTTTGCAAACGAGGCGGCATCTAAGCTATTTAA
ACGAACTCAGGAGCAGCTCAAACGTTCAAACGGTGACGAAGTCATCGCACCGAAATACCTCAACCTATCTCAGGAACACT
TCTGCGGCGGAATTGACGTCTACATTGACGATAGGCGTGAACACCTTTCAGCGGATGTATTGAAGCTGCCAGAAGGCTCT
GACATCCAGTATATGTACATATTCAACGTAGGCGGAGGCATTAACGCAACCCGCATTAATAATCTGGAAACCGCAGTTGA
AGCCCTGTCCAGCTATGCGTTTGAAGGTGACAAAGGCAAACTGCAACAGCTTAAAGAACTGGGTGGCGAGTTTACGCGAA
TCGCAGATAAAGTATCTGGTCGTGGTGGAGACAAGACAGAGCTCATGAGAGAGATTCTGGTTGATTCAATGACAACTGCG
ATTGACTACTGGGAATCGGAAACGGGACAAACCAAATTCTCTTTCGCAGAGCAGAGTGGCTTATGGCGCGTTTACCTTGA
TCGCAGCACGCTGCAAACTAGAACACTGGACAAATACCTTCGTGTTGAAACTCTGCCAAAAACTCCACGCTGGCGGACGG
TATTGAACTCTATCGAGTTTATTCTGGATAACTGCCATACGCCTGGCGCACAGCGTGACAAACTGGTTAGCCTGAGGGAT
AAGTTGCAAAAACTGCTTACCTCATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• Response regulator receiver domain (Response_reg) (724-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (374-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.568	100	0.716