Detailed information NTG0493654

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KIM28_RS28465
• Genome accession: NZ_CP074845
• Coordinates: 5502979..5503962 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196495.1
• Uniprot ID: -
• Organism: Escherichia coli strain 7_12_30A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5497979..5508962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIM28_RS28435 (KIM28_28080)	-	5498645..5498752 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM28_RS28440 (KIM28_28085)	-	5499128..5499235 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM28_RS28445 (KIM28_28090)	-	5499611..5499718 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM28_RS28450 (KIM28_28095)	-	5500094..5500201 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KIM28_RS28455 (KIM28_28100)	yhjV	5500677..5501948 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
KIM28_RS28460 (KIM28_28105)	dppF	5501978..5502982 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KIM28_RS28465 (KIM28_28110)	amiE	5502979..5503962 (-)	984	WP_001196495.1	dipeptide ABC transporter ATP-binding protein	Regulator
KIM28_RS28470 (KIM28_28115)	dppC	5503973..5504875 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KIM28_RS28475 (KIM28_28120)	dppB	5504885..5505904 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
KIM28_RS28480 (KIM28_28125)	dppA	5506055..5507662 (-)	1608	WP_001222868.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35828.40 Da
• Isoelectric Point: 6.7584

>NTDB_id=493654 KIM28_RS28465 WP_001196495.1 5502979..5503962(-) (amiE) [Escherichia coli strain 7_12_30A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDIYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=493654 KIM28_RS28465 WP_001196495.1 5502979..5503962(-) (amiE) [Escherichia coli strain 7_12_30A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGTTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATATTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401