Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   IMZ18_RS22635 Genome accession   NZ_CP063151
Coordinates   3089543..3089683 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain CMIN-4     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3084543..3094683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMZ18_RS22630 - 3088425..3089597 (-) 1173 Protein_3266 condensation domain-containing protein -
  IMZ18_RS22635 comS 3089543..3089683 (-) 141 WP_225910706.1 competence protein ComS Regulator
  IMZ18_RS22640 srfAB 3089775..3092819 (-) 3045 Protein_3268 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=493514 IMZ18_RS22635 WP_225910706.1 3089543..3089683(-) (comS) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=493514 IMZ18_RS22635 WP_225910706.1 3089543..3089683(-) (comS) [Bacillus subtilis subsp. subtilis strain CMIN-4]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978