Detailed information NTG0493501

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: IMZ18_RS18490
• Genome accession: NZ_CP063151
• Coordinates: 3477140..3478252 (-)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain CMIN-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3472140..3483252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMZ18_RS18475 (IMZ18_18475)	gyrA	3472230..3474695 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
IMZ18_RS18480 (IMZ18_18480)	gyrB	3474906..3476822 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
IMZ18_RS18485 (IMZ18_18485)	remB	3476877..3477122 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
IMZ18_RS18490 (IMZ18_18490)	recF	3477140..3478252 (-)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
IMZ18_RS18495 (IMZ18_18495)	rlbA	3478268..3478483 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
IMZ18_RS18500 (IMZ18_18500)	dnaN	3478614..3479750 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
IMZ18_RS18505 (IMZ18_18505)	dnaA	3479939..3481279 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
IMZ18_RS18510 (IMZ18_18510)	rpmH	3481906..3482040 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
IMZ18_RS18515 (IMZ18_18515)	rnpA	3482192..3482542 (+)	351	WP_014481515.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=493501 IMZ18_RS18490 WP_014478578.1 3477140..3478252(-) (recF) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=493501 IMZ18_RS18490 WP_014478578.1 3477140..3478252(-) (recF) [Bacillus subtilis subsp. subtilis strain CMIN-4]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995