Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IMZ18_RS13885 Genome accession   NZ_CP063151
Coordinates   2561727..2562521 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain CMIN-4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2556727..2567521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMZ18_RS13850 (IMZ18_13850) ephM 2557570..2558430 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  IMZ18_RS13855 (IMZ18_13855) spdL 2558417..2558749 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  IMZ18_RS13860 (IMZ18_13860) yfhK 2558834..2559352 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  IMZ18_RS13865 (IMZ18_13865) yfhJ 2559497..2559766 (-) 270 WP_003243789.1 YfhJ family protein -
  IMZ18_RS13870 (IMZ18_13870) sspK 2559891..2560043 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  IMZ18_RS13875 (IMZ18_13875) yfhI 2560075..2561268 (-) 1194 WP_003243500.1 MFS transporter -
  IMZ18_RS13880 (IMZ18_13880) yfhH 2561411..2561725 (-) 315 WP_003244592.1 YfhH family protein -
  IMZ18_RS13885 (IMZ18_13885) recX 2561727..2562521 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  IMZ18_RS13890 (IMZ18_13890) yfhF 2562610..2563521 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  IMZ18_RS13895 (IMZ18_13895) yfhE 2563576..2563686 (+) 111 WP_003223230.1 YfhE family protein -
  IMZ18_RS13900 (IMZ18_13900) yfhD 2563752..2563943 (+) 192 WP_014479215.1 YfhD family protein -
  IMZ18_RS13905 (IMZ18_13905) yfhC 2563982..2564566 (-) 585 WP_033881364.1 nitroreductase -
  IMZ18_RS13910 (IMZ18_13910) yfhB 2564654..2565535 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  IMZ18_RS13915 (IMZ18_13915) sxzA 2565650..2566681 (-) 1032 WP_003233568.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=493489 IMZ18_RS13885 WP_014479217.1 2561727..2562521(-) (recX) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=493489 IMZ18_RS13885 WP_014479217.1 2561727..2562521(-) (recX) [Bacillus subtilis subsp. subtilis strain CMIN-4]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992