Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   IMY14_RS07755 Genome accession   NZ_CP063150
Coordinates   1487585..1488160 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain s-16     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1482585..1493160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMY14_RS07725 dapD 1482772..1483482 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  IMY14_RS07730 dapI 1483552..1484676 (+) 1125 WP_047182548.1 N-acetyldiaminopimelate deacetylase -
  IMY14_RS07735 ykuS 1484738..1484983 (+) 246 WP_003232382.1 YkuS family protein -
  IMY14_RS07740 mscT 1485020..1485823 (-) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  IMY14_RS07745 ahpA 1486060..1486602 (+) 543 WP_047182549.1 biofilm-specific peroxidase AhpA -
  IMY14_RS07750 ykuV 1486673..1487119 (+) 447 WP_047182550.1 thiol-disulfide oxidoreductase YkuV -
  IMY14_RS07755 rok 1487585..1488160 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  IMY14_RS07760 cse15 1488201..1489166 (-) 966 WP_047182551.1 spore protein Cse15 -
  IMY14_RS07765 mobA 1489303..1489902 (+) 600 WP_047182552.1 molybdenum cofactor guanylyltransferase -
  IMY14_RS07770 moeB 1489953..1490972 (+) 1020 WP_015383546.1 molybdopterin-synthase adenylyltransferase MoeB -
  IMY14_RS07775 glp 1490990..1492282 (+) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  IMY14_RS07780 mobB 1492243..1492764 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=493388 IMY14_RS07755 WP_003232378.1 1487585..1488160(+) (rok) [Bacillus subtilis strain s-16]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=493388 IMY14_RS07755 WP_003232378.1 1487585..1488160(+) (rok) [Bacillus subtilis strain s-16]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACTACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1