Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   IMY14_RS07655 Genome accession   NZ_CP063150
Coordinates   1471704..1472168 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain s-16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466704..1477168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMY14_RS07635 kinA 1467171..1468991 (+) 1821 WP_047182543.1 sporulation histidine kinase KinA -
  IMY14_RS07640 dapX 1469001..1470182 (-) 1182 WP_014476653.1 aminotransferase A -
  IMY14_RS07645 - 1470384..1470545 (-) 162 WP_003245246.1 hypothetical protein -
  IMY14_RS07650 cheV 1470749..1471660 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  IMY14_RS07655 kre 1471704..1472168 (-) 465 WP_003232406.1 YkyB family protein Regulator
  IMY14_RS07660 ykuC 1472294..1473586 (-) 1293 WP_047182544.1 MFS transporter -
  IMY14_RS07665 ltdD 1473662..1474156 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  IMY14_RS07670 ppeE 1474213..1475073 (-) 861 WP_047182545.1 metallophosphoesterase -
  IMY14_RS07675 fadH 1475216..1475980 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=493387 IMY14_RS07655 WP_003232406.1 1471704..1472168(-) (kre) [Bacillus subtilis strain s-16]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=493387 IMY14_RS07655 WP_003232406.1 1471704..1472168(-) (kre) [Bacillus subtilis strain s-16]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1