Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   IMY14_RS06250 Genome accession   NZ_CP063150
Coordinates   1216734..1217390 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain s-16     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211734..1222390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMY14_RS06220 oppF 1212199..1213116 (+) 918 WP_047182432.1 oligopeptide ABC transporter ATP-binding protein OppF -
  IMY14_RS06225 yjbB 1213220..1214437 (+) 1218 WP_080344185.1 MFS transporter -
  IMY14_RS06230 yjbC 1214601..1215179 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  IMY14_RS06235 spx 1215360..1215755 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  IMY14_RS06240 yjbE 1215801..1216457 (-) 657 WP_003232944.1 TerC family protein -
  IMY14_RS06245 - 1216627..1216767 (+) 141 WP_119122854.1 hypothetical protein -
  IMY14_RS06250 mecA 1216734..1217390 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  IMY14_RS06255 - 1217385..1217506 (-) 122 Protein_1179 hypothetical protein -
  IMY14_RS06260 coiA 1217550..1218701 (+) 1152 WP_047182434.1 competence protein CoiA Machinery gene
  IMY14_RS06265 pepF 1218931..1220760 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  IMY14_RS06270 - 1220798..1220965 (-) 168 WP_003244944.1 hypothetical protein -
  IMY14_RS06275 spxH 1221280..1222179 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=493382 IMY14_RS06250 WP_015383354.1 1216734..1217390(+) (mecA) [Bacillus subtilis strain s-16]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=493382 IMY14_RS06250 WP_015383354.1 1216734..1217390(+) (mecA) [Bacillus subtilis strain s-16]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995