Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IMY14_RS02145 Genome accession   NZ_CP063150
Coordinates   422858..423808 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis strain s-16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 417858..428808
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMY14_RS02120 rapC 419318..420466 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  IMY14_RS02125 phrC 420450..420572 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  IMY14_RS02130 yczM 420672..420761 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  IMY14_RS02135 yczN 420843..420956 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  IMY14_RS02140 thrD 421109..422473 (-) 1365 WP_063336058.1 aspartate kinase -
  IMY14_RS02145 ceuB 422858..423808 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  IMY14_RS02150 yclO 423801..424748 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  IMY14_RS02155 yclP 424742..425500 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  IMY14_RS02160 yclQ 425522..426475 (+) 954 WP_063336060.1 petrobactin ABC transporter substrate-binding protein YclQ -
  IMY14_RS02165 cdaE 426521..427939 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=493368 IMY14_RS02145 WP_015382768.1 422858..423808(+) (ceuB) [Bacillus subtilis strain s-16]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=493368 IMY14_RS02145 WP_015382768.1 422858..423808(+) (ceuB) [Bacillus subtilis strain s-16]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAACAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTAGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528