Detailed information NTG0493328

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: IMZ16_RS06265
• Genome accession: NZ_CP063145
• Coordinates: 1276801..1277907 (+)
• Length: 368 a.a.
• NCBI ID: WP_073177934.1
• Uniprot ID: A0A1M6B1K4
• Organism: Cruoricaptor ignavus strain M1214
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1271801..1282907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMZ16_RS06245 (IMZ16_06245)	-	1271971..1272432 (-)	462	WP_193439321.1	META domain-containing protein	-
IMZ16_RS06250 (IMZ16_06250)	-	1272483..1274624 (+)	2142	WP_193439322.1	S46 family peptidase	-
IMZ16_RS06255 (IMZ16_06255)	-	1274679..1275797 (-)	1119	WP_193439323.1	DUF3078 domain-containing protein	-
IMZ16_RS06260 (IMZ16_06260)	-	1275909..1276676 (+)	768	WP_193439324.1	rhomboid family intramembrane serine protease	-
IMZ16_RS06265 (IMZ16_06265)	dprA	1276801..1277907 (+)	1107	WP_073177934.1	DNA-processing protein DprA	Machinery gene
IMZ16_RS06270 (IMZ16_06270)	gdhA	1277998..1279356 (+)	1359	WP_193439325.1	NADP-specific glutamate dehydrogenase	-
IMZ16_RS06275 (IMZ16_06275)	-	1279475..1280326 (+)	852	WP_193439326.1	UDP-2,3-diacylglucosamine diphosphatase	-
IMZ16_RS06280 (IMZ16_06280)	-	1280323..1280832 (-)	510	WP_193439327.1	thioesterase family protein	-
IMZ16_RS06285 (IMZ16_06285)	-	1280851..1281816 (-)	966	WP_193439328.1	ferric siderophore ABC transporter substrate-binding protein	-
IMZ16_RS06290 (IMZ16_06290)	-	1281821..1282219 (-)	399	WP_193439329.1	biopolymer transporter ExbD	-
IMZ16_RS06295 (IMZ16_06295)	-	1282222..1282902 (-)	681	WP_193439330.1	MotA/TolQ/ExbB proton channel family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40609.42 Da
• Isoelectric Point: 6.2419

>NTDB_id=493328 IMZ16_RS06265 WP_073177934.1 1276801..1277907(+) (dprA) [Cruoricaptor ignavus strain M1214]
MFSEEHLYSIALRSAAFIGDFNFRKLTDALGSAENVWKASRNSLLGIEGIGLKTASDIGNEEHLKFAEKELIFCEKQKIK
ILLRQRNELPFLLNECDDAPSVLYLMGKTDEEKFPVSIVGTRNLTAYGRQFIYELHQAIQSRSAITVSGLALGADTQVHR
ESLSAGIPTIAVLAHGFQTLYPSQNRKLAEEILNSGGALLTEFNSSQRPDREHFIQRNRVIAGLSEATIVVESAFGGGSM
STVNFANQYSRDVYALPGKITDRFSQGCNQLIAQHKAAAIATIPDLVHQIFGKTELQQPELFSRKEVPSAILPHQKEIYE
AIAASPNIPLDELSEILSLPSYRILPVVLELEIAGLIKTLSGRQFVAI

Nucleotide

• Length: 1107 bp

>NTDB_id=493328 IMZ16_RS06265 WP_073177934.1 1276801..1277907(+) (dprA) [Cruoricaptor ignavus strain M1214]
ATGTTTTCCGAGGAGCACCTCTATTCCATCGCGCTGCGCAGCGCAGCTTTTATAGGCGATTTTAATTTCCGAAAGCTTAC
CGACGCTCTCGGCTCAGCAGAAAATGTCTGGAAAGCCAGCAGGAACAGCCTTTTAGGAATCGAGGGAATTGGGCTAAAAA
CCGCATCAGATATCGGAAATGAGGAGCATCTAAAATTCGCGGAAAAAGAATTAATTTTTTGCGAAAAACAAAAAATAAAA
ATTCTGCTTCGCCAAAGAAACGAGCTGCCATTTTTGCTTAATGAATGTGATGATGCGCCGTCCGTACTTTATTTAATGGG
CAAAACTGATGAGGAAAAATTCCCCGTAAGCATCGTGGGCACCAGGAACCTCACGGCCTATGGCAGGCAGTTCATCTACG
AGCTGCATCAGGCAATCCAAAGCCGCAGTGCCATTACCGTGAGCGGGCTTGCCCTGGGTGCGGATACGCAGGTTCACAGG
GAATCCCTCTCGGCAGGAATTCCTACCATAGCCGTTCTGGCACACGGTTTCCAAACGCTTTACCCTTCCCAAAACAGAAA
ACTTGCGGAGGAAATCCTAAATTCCGGCGGGGCACTCCTTACAGAATTTAATTCTTCTCAAAGGCCTGACCGAGAGCATT
TTATCCAGAGGAACCGTGTCATTGCCGGACTTTCTGAAGCGACCATCGTGGTGGAATCTGCTTTTGGCGGCGGCTCTATG
AGCACCGTAAATTTTGCCAACCAGTACAGCCGGGATGTGTATGCCCTGCCGGGAAAGATCACCGACAGGTTCAGCCAGGG
CTGCAATCAGCTGATCGCCCAGCACAAAGCCGCAGCTATTGCCACAATTCCGGACCTTGTGCACCAAATTTTTGGCAAAA
CCGAACTGCAGCAACCGGAGCTATTCAGCAGAAAAGAAGTGCCTTCCGCCATTCTGCCCCACCAGAAGGAAATTTATGAA
GCCATAGCCGCAAGCCCAAACATTCCGCTGGACGAGCTTTCCGAAATTCTCTCATTGCCTTCTTACAGAATTTTGCCCGT
AGTTTTGGAGCTGGAAATCGCAGGGCTGATAAAAACGCTTTCTGGCAGGCAGTTTGTAGCTATTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (314-362)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

3D structure

• AlphaFold DB: A0A1M6B1K4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	50	99.457	0.497