Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KIM35_RS23080 | Genome accession | NZ_CP074815 |
| Coordinates | 4542309..4543289 (-) | Length | 326 a.a. |
| NCBI ID | WP_001055633.1 | Uniprot ID | - |
| Organism | Escherichia coli strain 7_33_80A | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4537309..4548289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIM35_RS23050 (KIM35_22760) | yggI | 4537972..4538469 (+) | 498 | WP_000858396.1 | SprT family zinc-dependent metalloprotease | - |
| KIM35_RS23055 (KIM35_22765) | endA | 4538564..4539271 (+) | 708 | WP_000286500.1 | deoxyribonuclease I | - |
| KIM35_RS23060 (KIM35_22770) | rsmE | 4539351..4540082 (+) | 732 | WP_001222508.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| KIM35_RS23065 (KIM35_22775) | gshB | 4540095..4541045 (+) | 951 | WP_032345038.1 | glutathione synthase | - |
| KIM35_RS23070 (KIM35_22780) | yqgE | 4541154..4541717 (+) | 564 | WP_001053178.1 | YqgE/AlgH family protein | - |
| KIM35_RS23075 (KIM35_22785) | ruvX | 4541717..4542133 (+) | 417 | WP_000017111.1 | Holliday junction resolvase RuvX | - |
| KIM35_RS23080 (KIM35_22790) | pilT | 4542309..4543289 (-) | 981 | WP_001055633.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| KIM35_RS23085 (KIM35_22795) | yggS | 4543307..4544011 (+) | 705 | WP_000997795.1 | pyridoxal phosphate homeostasis protein | - |
| KIM35_RS23090 (KIM35_22800) | yggT | 4544029..4544595 (+) | 567 | WP_001094831.1 | osmotic shock tolerance protein YggT | - |
| KIM35_RS23095 (KIM35_22805) | yggU | 4544592..4544882 (+) | 291 | WP_001277222.1 | DUF167 family protein YggU | - |
| KIM35_RS23100 (KIM35_22810) | rdgB | 4544890..4545483 (+) | 594 | WP_001174742.1 | XTP/dITP diphosphatase | - |
| KIM35_RS23105 (KIM35_22815) | hemW | 4545476..4546612 (+) | 1137 | WP_000239919.1 | radical SAM family heme chaperone HemW | - |
| KIM35_RS23110 (KIM35_22820) | - | 4546923..4547909 (+) | 987 | WP_000784004.1 | TRAP transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35893.04 Da Isoelectric Point: 5.5860
>NTDB_id=493084 KIM35_RS23080 WP_001055633.1 4542309..4543289(-) (pilT) [Escherichia coli strain 7_33_80A]
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
MNMEEIVALSVKHNVSDLHLCSAWSARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRG
SAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS
FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMLTFQQSYQQR
VGEGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=493084 KIM35_RS23080 WP_001055633.1 4542309..4543289(-) (pilT) [Escherichia coli strain 7_33_80A]
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGTCCGCACG
ATGGCGCATTCGCGGGCTAATGGAAGCTGCGCCGTTTGATGCGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATG
ACGATCAGCGGGCAATATTGCTGGAAAATGGCCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGGTTGCGTGGC
AGTGCGTTCGCGCAACGGCAAGGTATTTCTCTGGCATTACGGTTGTTACCTTCGCACTGTCCACAGCTCGAACAGCTTGG
CGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGCGGCAAAT
CTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAA
TATATCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCG
GGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGG
CGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCA
TTTCCGGCGCAGGAAAAAGATCCCGTACGTAATCAACTGGCAGGTAGTTTACGGGCCGTGTTGTCACAAAAGCTGGAAGT
GGATAAACAGGAAGGACGCGTGGCGCTGTTTGAATTATTGATTAACACTCCCGCGGTGGGGAATTTGATTCGCGAAGGGA
AAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGTTAACGTTTCAGCAGAGTTATCAGCAGCGG
GTGGGGGAAGGGCGTTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.