Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   INP94_RS02005 Genome accession   NZ_CP063120
Coordinates   416562..417230 (-) Length   222 a.a.
NCBI ID   WP_197543870.1    Uniprot ID   A0A7M1NXM2
Organism   Haemophilus parainfluenzae strain M1C137_2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 411562..422230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INP94_RS02005 (INP94_02005) sxy/tfoX 416562..417230 (-) 669 WP_197543870.1 TfoX/Sxy family DNA transformation protein Regulator
  INP94_RS02010 (INP94_02010) - 417458..418300 (+) 843 WP_197543871.1 patatin-like phospholipase family protein -
  INP94_RS02015 (INP94_02015) recA 418437..419492 (+) 1056 WP_065285491.1 recombinase RecA Machinery gene
  INP94_RS02020 (INP94_02020) recX 419562..420014 (+) 453 WP_197543872.1 recombination regulator RecX -
  INP94_RS02025 (INP94_02025) crcB 419989..420384 (-) 396 WP_197543873.1 fluoride efflux transporter CrcB -
  INP94_RS02030 (INP94_02030) - 420385..421203 (-) 819 WP_197543874.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25537.87 Da        Isoelectric Point: 10.3445

>NTDB_id=493072 INP94_RS02005 WP_197543870.1 416562..417230(-) (sxy/tfoX) [Haemophilus parainfluenzae strain M1C137_2]
MKTLIIPNDHISKVCNLLNQLIGDVTSKNLFTGYGLFHKEKDMFAIWANNKIYLRAKHELSIKLKGLGCKPFATNELNKR
FVLSDYYALTESILKDNALMRNLLILSISQIRKEKLDSALSKIGRIRDLPNLSVKYERALKKVGIDNVDTLRQIGAENAI
IRLKKADIGATEAFYWRLRGALENRNCEFYTEKEKERGLNKLNEMLSANGFRRCKRTLKTVE

Nucleotide


Download         Length: 669 bp        

>NTDB_id=493072 INP94_RS02005 WP_197543870.1 416562..417230(-) (sxy/tfoX) [Haemophilus parainfluenzae strain M1C137_2]
ATGAAAACTCTCATAATCCCAAATGATCATATCAGTAAAGTATGTAATTTGTTAAATCAACTCATTGGAGATGTGACAAG
TAAAAATCTATTTACGGGATATGGCTTGTTTCATAAAGAGAAAGATATGTTTGCTATTTGGGCAAACAATAAGATTTACT
TGCGTGCAAAACATGAGCTTTCGATAAAGCTAAAAGGATTAGGATGTAAGCCTTTTGCAACAAATGAACTCAATAAACGC
TTTGTGCTATCTGATTATTATGCTTTAACTGAAAGTATTTTGAAAGATAATGCTTTAATGAGAAATTTGCTTATTCTTTC
TATTAGTCAAATCAGGAAGGAAAAATTAGATTCTGCATTATCCAAGATTGGACGAATTCGTGATTTACCAAATTTATCTG
TAAAGTATGAAAGAGCGCTAAAGAAAGTAGGAATAGATAATGTCGATACCTTACGTCAAATAGGTGCTGAAAATGCGATT
ATTCGTTTGAAAAAAGCAGATATTGGTGCAACAGAGGCTTTTTATTGGCGGCTTCGTGGTGCTTTAGAAAACCGCAACTG
CGAGTTTTATACTGAAAAAGAAAAGGAGAGAGGTCTGAATAAACTGAATGAAATGCTTTCTGCAAACGGGTTTAGACGCT
GTAAACGAACTCTAAAAACGGTTGAATAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(17-110)

TfoX C-terminal domain (TfoX_C)

(125-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7M1NXM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Haemophilus influenzae Rd KW20

59.42

93.243

0.554