Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   A0071_RS00375 Genome accession   NZ_CP063091
Coordinates   89803..90282 (-) Length   159 a.a.
NCBI ID   WP_027305214.1    Uniprot ID   A0A1W6BY34
Organism   Campylobacter cuniculorum strain 2010D-8469     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 84803..95282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0071_RS00365 (A0071_00365) - 86051..87946 (+) 1896 WP_164502912.1 DUF2972 domain-containing protein -
  A0071_RS00370 (A0071_00370) - 87974..89806 (-) 1833 WP_027305215.1 primosomal protein N' -
  A0071_RS00375 (A0071_00375) Cj0683 89803..90282 (-) 480 WP_027305214.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  A0071_RS00380 (A0071_00380) - 90279..90524 (-) 246 WP_027305213.1 hypothetical protein -
  A0071_RS00385 (A0071_00385) - 90514..90744 (-) 231 WP_027305212.1 hypothetical protein -
  A0071_RS00390 (A0071_00390) uvrB 90901..92874 (+) 1974 WP_027305211.1 excinuclease ABC subunit UvrB -
  A0071_RS00395 (A0071_00395) - 93198..94364 (-) 1167 WP_232087684.1 restriction endonuclease subunit R -
  A0071_RS00400 (A0071_00400) - 94364..95128 (-) 765 WP_035175630.1 DNA-methyltransferase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18342.61 Da        Isoelectric Point: 8.9433

>NTDB_id=492850 A0071_RS00375 WP_027305214.1 89803..90282(-) (Cj0683) [Campylobacter cuniculorum strain 2010D-8469]
MKVKKAFTLLELVFVILIIGILALISFPFLNQNKNDAKLLKLKADYQMLQSALASMRSEFSLKQIAHFSPILDSAKIAFE
KEKLFYCEKKEILNCQNGINCCSYSVLSSPLYSHSKAWIKQGFNHYRFFLNSKESVDFIYNANEGILECLHSKWCKELL

Nucleotide


Download         Length: 480 bp        

>NTDB_id=492850 A0071_RS00375 WP_027305214.1 89803..90282(-) (Cj0683) [Campylobacter cuniculorum strain 2010D-8469]
ATGAAAGTTAAAAAAGCTTTTACCCTGCTTGAACTCGTTTTTGTGATATTAATCATAGGAATTTTAGCCCTTATTTCTTT
TCCTTTTTTAAATCAAAATAAAAATGATGCCAAATTATTGAAACTCAAAGCCGATTATCAAATGCTTCAATCCGCCCTTG
CCTCGATGAGAAGTGAATTTTCACTCAAGCAAATTGCACATTTTAGCCCCATACTTGATAGTGCAAAAATAGCCTTTGAA
AAAGAAAAATTATTTTATTGTGAAAAAAAAGAAATTCTAAATTGTCAAAATGGCATAAATTGTTGTTCTTATTCTGTTTT
AAGCTCCCCTTTGTATTCTCATTCTAAGGCTTGGATTAAACAAGGCTTTAACCATTATCGTTTTTTTTTAAATTCCAAAG
AAAGTGTGGATTTTATCTATAATGCAAATGAGGGCATTTTAGAATGTCTGCATAGCAAATGGTGTAAAGAGCTTTTATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1W6BY34

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

54.14

98.742

0.535