Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   A0083_RS01700 Genome accession   NZ_CP063089
Coordinates   317767..318945 (+) Length   392 a.a.
NCBI ID   WP_197553746.1    Uniprot ID   -
Organism   Campylobacter sp. 2014D-0216     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 312767..323945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A0083_RS01680 (A0083_01680) - 313886..314485 (+) 600 WP_197553737.1 gamma-glutamyl-CDP-amidate hydrolase -
  A0083_RS01685 (A0083_01685) - 314482..315243 (+) 762 WP_197553740.1 phosphocholine cytidylyltransferase family protein -
  A0083_RS01690 (A0083_01690) - 315240..315746 (+) 507 WP_039662840.1 adenylyl-sulfate kinase -
  A0083_RS01695 (A0083_01695) - 315743..317770 (+) 2028 WP_197553743.1 capsular polysaccharide biosynthesis protein -
  A0083_RS01700 (A0083_01700) kpsS 317767..318945 (+) 1179 WP_197553746.1 capsular biosynthesis protein Regulator
  A0083_RS01705 (A0083_01705) - 318942..320450 (-) 1509 WP_197553749.1 SGNH/GDSL hydrolase family protein -
  A0083_RS01710 (A0083_01710) - 320616..321752 (+) 1137 WP_197553752.1 DUF829 domain-containing protein -
  A0083_RS01715 (A0083_01715) - 321761..323134 (+) 1374 WP_197553755.1 cytochrome P450 -
  A0083_RS01720 (A0083_01720) - 323131..323484 (+) 354 WP_232087566.1 hypothetical protein -

Sequence

Protein


Download         Length: 392 a.a.        Molecular weight: 46369.84 Da        Isoelectric Point: 10.1529

>NTDB_id=492837 A0083_RS01700 WP_197553746.1 317767..318945(+) (kpsS) [Campylobacter sp. 2014D-0216]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATRIPQAKVYKVNFNGGDFFFYPYNSINYTKSLAELEDFYKKLFEEKQIQV
VLMYNDCRKVHEIAINVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPRNKEFYLSQKKFDKEHKFITFSSTFTNM
AFASFLYWLFAFLLSWRFNNSLHHRSLKLFDFLPWFCSVYRKNKYKISEKKLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHAFWKECRAYKPDVVLHTKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=492837 A0083_RS01700 WP_197553746.1 317767..318945(+) (kpsS) [Campylobacter sp. 2014D-0216]
ATGAATTTAAGTAAGAAGTTAAAAAAATTTTCCGGTAAAAATGTTTTGTTACTTCAGGGTCCTGTGGGGGGATTTTTCCG
TAAAATTGCTACAAGAATTCCACAAGCTAAGGTTTATAAAGTAAATTTTAATGGCGGGGATTTTTTCTTTTATCCTTATA
ATAGTATTAATTATACCAAAAGCTTAGCTGAGCTTGAAGACTTTTATAAAAAACTTTTTGAAGAAAAACAAATTCAAGTA
GTGCTGATGTACAATGACTGTAGAAAAGTACATGAAATCGCCATTAATGTAGCTAAGCAAATGGGTATTGAAGTGTGGAT
TTTTGAAGAAGGTTATATAAGGCCAAACTTCATTACTTTTGAAAAAGACGGAGTGAATGCAAACTCAACTCTACCAAGAA
ATAAGGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGAGCATAAATTTATAACTTTTTCAAGCACATTTACAAATATG
GCCTTTGCTTCGTTTTTATACTGGCTTTTTGCTTTTTTACTTTCTTGGCGTTTTAACAATTCCTTGCACCATAGAAGTTT
AAAATTATTTGACTTTTTGCCTTGGTTTTGTTCAGTATATAGAAAAAATAAATACAAAATCAGCGAAAAAAAACTTAATG
AAAAAATTCTTTCTCTAAAGCAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACCCAGTTGTCTCATCACTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCTAAAGCAAAGTCTTATTTAGTTTT
TAAACATCATCCTATGGACCGTGGCTATAGGGATTATACTAAGCTTATAGAAGATTTGAGTTTAAAATATAATGTCGAGG
GTAGAATTTTATATGTGCATGATTTGCATTTACCTACACTTTTGATCAATGCAAGAGGTACTATAGTCATAAATAGCACA
GTAGGACTTTCTGCCTTATATCACAATAGTCCTTTAAAGGTTATGGGAAAAGCCTTTTATGATATAGAAGGCCTAACGTA
TCAAAAAAGCTTGCATGCCTTTTGGAAAGAGTGTAGAGCCTATAAGCCTGATGTAGTTTTGCATACTAAATTTAGAAACT
ATGTGATATATAAAACCCAAGTTAATGGAAATTTCTTCAAAAATACTAGCTTGGATTAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(80-386)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.278

100

0.628