Detailed information NTG0492831

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: A0Z60_RS06580
• Genome accession: NZ_CP063087
• Coordinates: 1302523..1303686 (-)
• Length: 387 a.a.
• NCBI ID: WP_101313248.1
• Uniprot ID: A0A2N3PHA8
• Organism: Helicobacter winghamensis strain 2015D-0170
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1297523..1308686

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0Z60_RS06555 (A0Z60_06555)	-	1298450..1299349 (-)	900	WP_006803064.1	branched-chain amino acid ABC transporter permease	-
A0Z60_RS06560 (A0Z60_06560)	-	1299373..1300488 (-)	1116	WP_006803063.1	ABC transporter substrate-binding protein	-
A0Z60_RS06565 (A0Z60_06565)	-	1300676..1301218 (-)	543	WP_006803062.1	YceI family protein	-
A0Z60_RS06570 (A0Z60_06570)	-	1301343..1301996 (+)	654	WP_101313247.1	thioredoxin domain-containing protein	-
A0Z60_RS06575 (A0Z60_06575)	-	1302080..1302481 (+)	402	WP_040498763.1	DUF5666 domain-containing protein	-
A0Z60_RS06580 (A0Z60_06580)	kpsS	1302523..1303686 (-)	1164	WP_101313248.1	capsule biosynthesis protein	Regulator
A0Z60_RS06585 (A0Z60_06585)	-	1303652..1305727 (-)	2076	WP_006803058.1	capsular polysaccharide biosynthesis protein	-
A0Z60_RS06590 (A0Z60_06590)	-	1305875..1306288 (-)	414	WP_197550055.1	hypothetical protein	-
A0Z60_RS06595 (A0Z60_06595)	-	1306468..1307148 (-)	681	WP_006803057.1	nucleotidyltransferase family protein	-
A0Z60_RS06600 (A0Z60_06600)	-	1307136..1307741 (-)	606	WP_006803056.1	SIS domain-containing protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45886.22 Da
• Isoelectric Point: 10.0516

>NTDB_id=492831 A0Z60_RS06580 WP_101313248.1 1302523..1303686(-) (kpsS) [Helicobacter winghamensis strain 2015D-0170]
MDLRKKLKQFSNKNILLLQGPIGDFFWRISKYLAGSNVYKINFNGGDFLFYPFKSINYRGDIEHLEGFYKNIFQAKNIQA
IIMYNDCRRIHEIAIKVAKEMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPKDRDFYLKYSPKEFESKRFSGTFSKMAF
FAFLYWLFAFLLGWYFNNTMHHRSLKLFDFLPWILSLLRKYKYQFTEKSVNTKILSLKQKYFLAILQVYNDTQISYHYNK
TIERFIEETILSFANHAKAKSYLVFKHHPMDRGYKNYAKLIETLSLKFNVEGRVLYVHDLHLPTLLTNARGCVVINSTVG
LSALYHNCPLKVVGRAFYDIDGLTYQGNLHSFWKECRSYKPSSRLHTRFRSYIIWKTQVNGSFYVGI

Nucleotide

• Length: 1164 bp

>NTDB_id=492831 A0Z60_RS06580 WP_101313248.1 1302523..1303686(-) (kpsS) [Helicobacter winghamensis strain 2015D-0170]
ATGGATCTAAGAAAAAAATTAAAACAATTTTCTAATAAAAATATTTTATTGTTGCAGGGTCCCATTGGAGATTTTTTTTG
GAGAATTTCGAAATATCTTGCAGGCTCTAATGTTTATAAAATCAATTTTAATGGCGGAGATTTTTTATTTTATCCTTTTA
AAAGTATAAATTATCGTGGTGATATAGAGCATCTTGAAGGGTTTTATAAAAATATTTTTCAAGCAAAGAATATCCAAGCT
ATCATTATGTACAATGACTGCAGAAGAATTCACGAGATTGCCATTAAAGTTGCTAAGGAGATGGGGATTGAAGTTTGGAT
TTTTGAAGAGGGATATATTCGTCCAAATTTTATTACTTTTGAAAAAGATGGAGTGAATGCTAATTCAACGCTACCAAAAG
ATAGAGATTTTTATCTAAAGTATTCCCCAAAAGAGTTTGAATCTAAGAGATTTTCAGGAACATTTTCAAAGATGGCTTTT
TTTGCATTTTTGTATTGGCTTTTTGCCTTTTTATTGGGATGGTATTTTAATAATACAATGCACCATAGAAGCTTAAAGCT
TTTTGATTTTTTGCCTTGGATTTTATCTTTACTTAGAAAATACAAATATCAATTTACAGAAAAAAGTGTGAATACAAAAA
TTTTATCGCTTAAGCAAAAATATTTTTTAGCAATTTTACAAGTGTATAATGATACACAAATTTCATATCATTATAATAAA
ACGATAGAGAGATTTATAGAAGAAACTATTTTGTCTTTTGCAAATCACGCAAAAGCAAAATCTTATTTGGTTTTTAAGCA
TCATCCTATGGACAGAGGATATAAAAATTACGCAAAGTTGATAGAGACTTTAAGTTTAAAATTTAATGTAGAAGGAAGAG
TTTTGTATGTGCATGATTTGCATCTTCCAACTCTTCTAACAAATGCAAGGGGTTGTGTGGTAATTAATAGCACGGTGGGA
TTATCCGCGCTTTATCATAATTGTCCATTAAAAGTGGTTGGAAGAGCCTTTTATGATATTGATGGATTGACTTATCAGGG
TAATTTACATTCTTTTTGGAAAGAATGCCGCTCATATAAACCAAGCTCAAGATTGCATACAAGATTTAGAAGTTACATTA
TTTGGAAAACGCAAGTCAATGGAAGCTTTTATGTGGGTATTTAA

Domains

Predicted by InterproScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (79-384)

3D structure

• AlphaFold DB: A0A2N3PHA8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.579	98.191	0.605