Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   IMC75_RS04795 Genome accession   NZ_CP063079
Coordinates   961246..962424 (+) Length   392 a.a.
NCBI ID   WP_044598341.1    Uniprot ID   -
Organism   Campylobacter peloridis strain 2016D-0074     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 956246..967424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMC75_RS08565 - 956749..958236 (+) 1488 WP_049984557.1 hypothetical protein -
  IMC75_RS04785 (IMC75_04785) - 958269..959270 (+) 1002 WP_044598340.1 glycosyltransferase -
  IMC75_RS04790 (IMC75_04790) - 959264..961249 (+) 1986 WP_044599475.1 capsular polysaccharide export protein -
  IMC75_RS04795 (IMC75_04795) kpsS 961246..962424 (+) 1179 WP_044598341.1 capsular polysaccharide export protein Regulator
  IMC75_RS04800 (IMC75_04800) - 962421..962858 (-) 438 WP_044598342.1 hypothetical protein -
  IMC75_RS04805 (IMC75_04805) - 962810..963937 (-) 1128 WP_044598343.1 SGNH/GDSL hydrolase family protein -
  IMC75_RS04810 (IMC75_04810) - 964100..965230 (+) 1131 WP_084083546.1 DUF829 domain-containing protein -
  IMC75_RS04815 (IMC75_04815) - 965243..966616 (+) 1374 WP_044598344.1 cytochrome P450 -
  IMC75_RS04820 (IMC75_04820) - 966613..966966 (+) 354 WP_044598345.1 membrane protein -

Sequence

Protein


Download         Length: 392 a.a.        Molecular weight: 46217.80 Da        Isoelectric Point: 10.2546

>NTDB_id=492799 IMC75_RS04795 WP_044598341.1 961246..962424(+) (kpsS) [Campylobacter peloridis strain 2016D-0074]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPQAKVYKVNFNGGDFFFYPFKSINYTKSLAELEDFYQKLFEEKQIQV
IIMYNDCRKVHEIAISVAKQMGIEVWIFEEGYIRPNFITFEKGGVNANSTLPREKEFYINQNKFNKDFKTKNFSGSFKNM
AFASFLYWLFAALFSWYFNNSLHHRSLKLFDFLPWFLSLYRKKKYKITEKAINEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIVSFANHAKVKSYLIFKHHPMDRGYRDYTKLIKDLSLKYNVEGRILYVHDLHLPTLLINTKGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=492799 IMC75_RS04795 WP_044598341.1 961246..962424(+) (kpsS) [Campylobacter peloridis strain 2016D-0074]
ATGAATTTAAGTAAAAAATTAAAAAAATTTTCTGGAAAAAATGTTTTATTGCTCCAAGGACCTGTGGGAGGATTTTTTCG
TAAAATTGCTACAAAAATTCCACAAGCTAAGGTTTATAAAGTAAATTTTAATGGCGGGGATTTTTTCTTTTATCCTTTTA
AAAGCATTAATTATACTAAAAGTTTAGCCGAGCTTGAAGACTTTTATCAAAAGCTTTTTGAAGAAAAGCAAATTCAAGTT
ATCATTATGTATAATGATTGTAGAAAAGTGCATGAAATCGCCATTAGTGTTGCCAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGCTATATAAGACCAAATTTCATTACTTTTGAAAAAGGCGGAGTGAATGCAAACTCAACTTTACCAAGAG
AAAAAGAATTTTATATAAACCAAAATAAATTCAACAAAGATTTCAAAACAAAGAATTTTTCTGGCTCATTTAAAAATATG
GCTTTTGCTTCTTTTTTATACTGGCTTTTTGCTGCTTTGTTTTCTTGGTATTTTAATAATTCTTTACACCATAGAAGCTT
AAAATTATTTGACTTTTTACCTTGGTTTTTATCTTTATACAGAAAGAAAAAATACAAAATTACTGAAAAAGCAATCAATG
AAAAAATTCTTTCATTAAAGCAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACCCAACTTTCACATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAAGTGATTGTTTCTTTTGCAAATCATGCTAAAGTAAAGTCTTATCTAATTTT
TAAACATCATCCTATGGATCGTGGTTATAGAGACTATACTAAGCTTATAAAAGATTTGAGTTTAAAATACAATGTCGAGG
GTAGAATCTTATATGTGCATGATTTACACTTGCCTACACTTTTAATCAATACAAAAGGAACCATTGTTATAAACAGCACA
GTGGGACTTTCTGCTTTATATCACAATAGCCCCTTAAAGGTAATGGGTAAAGCCTTTTATGATATAGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAGTGCAGGGCATATAAGCCTGATGCTGTTTTACACGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTTAATGGGAATTTTTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(80-386)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.266

100

0.617