Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IMF22_RS25845 Genome accession   NZ_CP063073
Coordinates   5787528..5787935 (+) Length   135 a.a.
NCBI ID   WP_106575669.1    Uniprot ID   A0A7M1KEX5
Organism   Pseudomonas poae strain PMA22     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5782528..5792935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMF22_RS25820 (IMF22_25820) pyrR 5783505..5784011 (-) 507 WP_197626495.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  IMF22_RS25825 (IMF22_25825) ruvX 5784084..5784521 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  IMF22_RS25830 (IMF22_25830) - 5784521..5785090 (-) 570 WP_078739562.1 YqgE/AlgH family protein -
  IMF22_RS25835 (IMF22_25835) - 5785352..5786257 (-) 906 WP_197626496.1 energy transducer TonB -
  IMF22_RS25840 (IMF22_25840) gshB 5786335..5787288 (-) 954 WP_197626497.1 glutathione synthase -
  IMF22_RS25845 (IMF22_25845) pilG 5787528..5787935 (+) 408 WP_106575669.1 twitching motility response regulator PilG Regulator
  IMF22_RS25850 (IMF22_25850) pilH 5787982..5788347 (+) 366 WP_197626498.1 twitching motility response regulator PilH -
  IMF22_RS25855 (IMF22_25855) - 5788360..5788884 (+) 525 WP_177017846.1 chemotaxis protein CheW -
  IMF22_RS25860 (IMF22_25860) - 5788881..5790932 (+) 2052 WP_159960627.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14950.46 Da        Isoelectric Point: 7.3843

>NTDB_id=492745 IMF22_RS25845 WP_106575669.1 5787528..5787935(+) (pilG) [Pseudomonas poae strain PMA22]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=492745 IMF22_RS25845 WP_106575669.1 5787528..5787935(+) (pilG) [Pseudomonas poae strain PMA22]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACGTGGGGTGCGAAGTCATTACGGCCATCGACGGTTTCGATGCACTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTACGTGCCCGGTTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7M1KEX5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659