Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   IMX20_RS06145 Genome accession   NZ_CP063065
Coordinates   1313609..1315384 (-) Length   591 a.a.
NCBI ID   WP_197558048.1    Uniprot ID   A0A7M1KTP9
Organism   Aerococcus urinaeequi strain T43     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1308609..1320384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMX20_RS06120 (IMX20_06120) - 1308809..1310461 (-) 1653 WP_197558045.1 FAD-dependent oxidoreductase -
  IMX20_RS06125 (IMX20_06125) - 1310461..1310766 (-) 306 WP_197558046.1 rhodanese-like domain-containing protein -
  IMX20_RS06130 (IMX20_06130) trxA 1310789..1311109 (-) 321 WP_197558047.1 thioredoxin -
  IMX20_RS06135 (IMX20_06135) yidD 1311090..1311386 (-) 297 WP_197559123.1 membrane protein insertion efficiency factor YidD -
  IMX20_RS06140 (IMX20_06140) rcrQ 1311853..1313616 (-) 1764 WP_232089588.1 ABC transporter ATP-binding protein Regulator
  IMX20_RS06145 (IMX20_06145) rcrP 1313609..1315384 (-) 1776 WP_197558048.1 ABC transporter ATP-binding protein Regulator
  IMX20_RS06150 (IMX20_06150) - 1315413..1315862 (-) 450 WP_197558049.1 MarR family winged helix-turn-helix transcriptional regulator -
  IMX20_RS06155 (IMX20_06155) purD 1316123..1317376 (-) 1254 WP_197558050.1 phosphoribosylamine--glycine ligase -
  IMX20_RS06160 (IMX20_06160) purH 1317407..1318927 (-) 1521 WP_197558051.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  IMX20_RS06165 (IMX20_06165) purN 1318980..1319543 (-) 564 WP_197558052.1 phosphoribosylglycinamide formyltransferase -

Sequence

Protein


Download         Length: 591 a.a.        Molecular weight: 65403.42 Da        Isoelectric Point: 4.6399

>NTDB_id=492675 IMX20_RS06145 WP_197558048.1 1313609..1315384(-) (rcrP) [Aerococcus urinaeequi strain T43]
MLKILAKANKKEKFFALLSVLLIMLQVYLELEIPDYMSEITELLQMPDTVTADIWEPGLIMVGLSLASFASAILVGFFAA
RIAASLTARIRGEVFDKVMSYSANEINQFSVPSLVTRSTNDLTQIQMLIALGLQVVLRGPIMSIWAIAKISGQNWQWSMT
TAVAVGVLLVMIGFIMYFAVPRFSKIQTLTDNLNAVTRENLTGLRVIRAYNAEEYQNKKFAKANDDLTNTQLFVNRVMGI
MQPGMTLVSSGLTLVVYWSGAYLIADAAQGTEQINLFSDMVVFSSYAMQVIIGFLLMVMIFMILPRAIVSAKRINQVLDL
APSIEYKEDAIQTSEQGSVEFKNVTFKYGDDAKPALKDINFKIKKGETLAIIGSTGSGKSTLIQMIPRLYDVSEGQVLVD
GQNVKDFDHAGLNNIVGYIPQKPVLFSGTIRSNMNLGESNEHLEHESLSDDEIWAALDTAQARDFVEGEPDQLDTHVAQG
GNNFSGGQKQRLGIARVLARKPEILIFDDSFSALDYQTDKTLRGVLAERMADTTKIIVAQRISTIMDADEILVLDRGEIV
GHGTHQELLADNKVYQEIAYSQLSEEELAND

Nucleotide


Download         Length: 1776 bp        

>NTDB_id=492675 IMX20_RS06145 WP_197558048.1 1313609..1315384(-) (rcrP) [Aerococcus urinaeequi strain T43]
GTGCTAAAAATATTAGCGAAAGCAAATAAAAAGGAAAAATTTTTCGCTTTACTAAGTGTGCTGCTGATTATGCTGCAAGT
TTACTTAGAGTTAGAAATCCCTGACTACATGTCAGAAATTACAGAATTACTACAAATGCCAGATACCGTGACAGCGGATA
TTTGGGAACCAGGTTTAATCATGGTTGGTTTATCTCTAGCATCTTTTGCCTCTGCTATATTGGTAGGATTTTTTGCTGCA
CGTATTGCTGCAAGTTTAACTGCCCGTATTCGTGGGGAAGTGTTTGATAAAGTCATGAGCTATTCAGCCAATGAAATCAA
CCAATTTTCAGTGCCAAGTTTAGTGACTCGTTCTACCAATGACTTGACCCAAATCCAAATGTTGATTGCTTTAGGACTAC
AAGTCGTTTTACGGGGACCAATCATGTCCATTTGGGCGATTGCGAAAATTTCCGGTCAAAACTGGCAATGGTCAATGACA
ACTGCTGTCGCTGTGGGTGTTTTATTAGTGATGATTGGATTTATCATGTACTTCGCTGTTCCTCGTTTCAGCAAAATCCA
AACCCTGACCGATAATTTAAATGCCGTGACTCGTGAAAACTTAACTGGTTTACGCGTTATTAGAGCTTACAATGCAGAAG
AATATCAAAATAAAAAATTCGCAAAAGCTAATGACGACTTAACCAACACACAACTCTTTGTTAACCGTGTAATGGGGATC
ATGCAACCCGGTATGACCCTCGTATCAAGTGGTTTAACCCTAGTAGTTTACTGGTCAGGTGCTTACTTAATCGCCGATGC
AGCACAAGGGACAGAGCAAATTAATCTATTTTCAGACATGGTTGTCTTCTCATCTTACGCCATGCAAGTTATCATCGGAT
TCCTGTTAATGGTTATGATCTTCATGATTCTACCGCGTGCCATTGTTTCGGCAAAACGGATCAACCAAGTGCTTGATCTA
GCACCATCCATTGAATATAAAGAAGATGCCATTCAAACAAGTGAACAGGGATCTGTCGAATTCAAAAACGTGACTTTTAA
ATACGGTGACGATGCCAAACCAGCCCTTAAAGACATTAATTTCAAAATCAAAAAGGGTGAAACCTTAGCCATTATCGGTT
CAACTGGTTCAGGTAAATCGACTTTAATCCAAATGATTCCACGTTTATACGACGTATCTGAAGGACAAGTACTTGTCGAT
GGGCAAAATGTCAAAGACTTTGACCACGCTGGCTTGAATAATATTGTCGGCTACATACCACAAAAACCAGTTCTATTTTC
AGGCACAATTCGTTCAAATATGAACCTTGGTGAAAGTAACGAACACCTTGAACATGAGTCCTTATCAGACGATGAAATTT
GGGCTGCCTTAGACACTGCACAAGCAAGAGACTTTGTTGAAGGAGAACCTGACCAATTAGATACCCATGTTGCCCAAGGT
GGTAACAACTTCTCCGGTGGTCAAAAGCAACGTTTAGGGATTGCCCGCGTACTTGCCCGTAAACCTGAGATTCTAATCTT
TGATGACTCATTCTCTGCTTTGGACTACCAGACAGATAAGACCTTGCGTGGCGTTTTAGCCGAACGTATGGCTGATACCA
CTAAGATCATTGTAGCCCAACGTATTTCAACTATTATGGATGCGGACGAGATTTTAGTACTAGATAGAGGCGAAATTGTT
GGCCACGGTACACACCAAGAATTATTAGCGGACAACAAGGTATACCAAGAAATTGCTTATTCACAATTATCAGAGGAGGA
ATTAGCAAATGACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-291)

ABC transporter (ABC_tran)

(356-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7M1KTP9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.478

100

0.575