Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   IL989_RS06800 Genome accession   NZ_CP062984
Coordinates   1330945..1331409 (-) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1325945..1336409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS06780 (IL989_06780) - 1326424..1328244 (+) 1821 WP_193351695.1 PAS domain-containing protein -
  IL989_RS06785 (IL989_06785) - 1328225..1329438 (-) 1214 Protein_1291 aminotransferase A -
  IL989_RS06790 (IL989_06790) - 1329640..1329801 (-) 162 WP_013352065.1 hypothetical protein -
  IL989_RS06795 (IL989_06795) cheV 1329990..1330901 (+) 912 WP_013352066.1 chemotaxis protein CheV -
  IL989_RS06800 (IL989_06800) kre 1330945..1331409 (-) 465 WP_013352067.1 YkyB family protein Regulator
  IL989_RS06805 (IL989_06805) - 1331531..1332823 (-) 1293 WP_193351696.1 MFS transporter -
  IL989_RS06810 (IL989_06810) - 1332899..1333393 (-) 495 WP_088613850.1 L,D-transpeptidase family protein -
  IL989_RS06815 (IL989_06815) - 1333468..1334331 (-) 864 WP_193351697.1 metallophosphoesterase -
  IL989_RS06820 (IL989_06820) fadH 1334475..1335239 (+) 765 WP_193351698.1 2,4-dienoyl-CoA reductase -
  IL989_RS06825 (IL989_06825) - 1335353..1335901 (+) 549 WP_193351699.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=492241 IL989_RS06800 WP_013352067.1 1330945..1331409(-) (kre) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=492241 IL989_RS06800 WP_013352067.1 1330945..1331409(-) (kre) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCCCTTGCCG
CCAACAGACAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935