Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   H4O27_RS10735 Genome accession   NZ_CP062976
Coordinates   2200659..2202701 (-) Length   680 a.a.
NCBI ID   WP_193004263.1    Uniprot ID   -
Organism   Neisseria yangbaofengii strain ZJ785     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2195659..2207701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4O27_RS10705 - 2195938..2196249 (+) 312 WP_165008699.1 GMC family oxidoreductase N-terminal domain-containing protein -
  H4O27_RS10710 murI 2196608..2197420 (-) 813 WP_193004424.1 glutamate racemase -
  H4O27_RS10715 tsaE 2197673..2198143 (+) 471 WP_165008719.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H4O27_RS10720 - 2198131..2199363 (+) 1233 WP_165008717.1 N-acetylmuramoyl-L-alanine amidase -
  H4O27_RS10725 - 2199513..2200013 (-) 501 WP_165008715.1 GNAT family N-acetyltransferase -
  H4O27_RS10730 - 2200026..2200562 (-) 537 WP_165008713.1 isochorismatase family protein -
  H4O27_RS10735 recG 2200659..2202701 (-) 2043 WP_193004263.1 ATP-dependent DNA helicase RecG Machinery gene
  H4O27_RS10740 secB 2202801..2203235 (-) 435 WP_165008711.1 protein-export chaperone SecB -
  H4O27_RS10745 grxC 2203259..2203516 (-) 258 WP_165008709.1 glutaredoxin 3 -
  H4O27_RS10750 rng 2203810..2205303 (+) 1494 WP_165008707.1 ribonuclease G -
  H4O27_RS10755 - 2205366..2206925 (-) 1560 WP_165008705.1 TerC family protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74999.76 Da        Isoelectric Point: 7.9611

>NTDB_id=492193 H4O27_RS10735 WP_193004263.1 2200659..2202701(-) (recG) [Neisseria yangbaofengii strain ZJ785]
MMTPETQKQLKVNDTTAKKLDKLHLHSAWDLALHLPLRYEDETHIIPIADAAAGVPCQVEGEVLHQEVTFKPRRQLVVQI
ADGSGSVLYLRFIHFYAGHQKQMAVGKRIRAVGEIKRGFYGDEMIHPKIRDADGTGLAESLTPIYPTVNGLNQPTLRRIV
QTALDSIPLHDTLPDDLLGRMKLPNLAESLRLLHSPPPSFTIRRLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGAA
APLNGNGSLVQKLLDSLPFALTRAQQRVAGEIKQDLTQTFPMHRLLQGDVGSGKTIVAALSALTAIEAGAQVAVMAPTEI
LAEQHFIKFKQWFEPLGLTVAWLSGSRRKKEKDSNKTAISDGLAQIAVGTHALFQDDVVFHNLGLVIVDEQHRFGVAQRL
ALKNKGNDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIKTRLVNSVRRAEVEGLVLGTCQKGQQAYWVCPLI
EESETLQLQTAVDTLAELQTALPELNIGLVHGRMKPAEKAEVMAGFIAGRLNVLVATTVIEVGVDVPNASLMVIEHAERM
GLAQLHQLRGRVGRGAAASTCVLLFTEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPKLIAERPDIVRAHLDRWLGSREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=492193 H4O27_RS10735 WP_193004263.1 2200659..2202701(-) (recG) [Neisseria yangbaofengii strain ZJ785]
ATGATGACACCCGAAACCCAAAAACAGCTCAAAGTCAACGATACTACCGCCAAAAAGCTCGACAAGCTTCATCTGCATAG
CGCATGGGATTTGGCGCTGCACCTGCCTTTGCGCTATGAAGACGAAACCCACATCATACCGATTGCCGATGCGGCGGCGG
GCGTGCCGTGTCAGGTGGAGGGGGAAGTGTTGCATCAGGAAGTCACCTTCAAGCCGCGTAGGCAGTTGGTGGTGCAGATT
GCCGATGGTTCCGGCAGTGTCTTGTATTTGCGCTTCATCCATTTTTACGCCGGCCACCAAAAGCAGATGGCGGTGGGTAA
ACGCATTCGAGCGGTGGGCGAAATCAAGCGCGGGTTTTACGGCGATGAGATGATTCACCCGAAAATCCGCGATGCCGACG
GCACCGGTTTGGCCGAAAGCCTCACGCCGATTTATCCGACTGTGAACGGCTTAAACCAGCCGACCCTGCGCCGTATCGTT
CAGACGGCCTTAGACAGCATTCCCTTGCACGATACCTTGCCCGATGATTTATTAGGCCGTATGAAACTGCCGAACTTGGC
CGAAAGCCTGCGCCTGCTGCACTCGCCGCCGCCGAGTTTCACCATCCGCCGGCTTTCGGACGGCACCTTGCCCGCGTGGC
AGCGGCTGAAATTTGATGAACTGTTGGCGCAGCAATTGTCCATGCGTTTGGCACGGCAAAAGCGTGTCAGCGGCGCGGCG
GCACCGTTAAACGGCAACGGCAGCTTGGTGCAAAAGCTGCTCGATTCGCTGCCGTTTGCTCTGACCCGGGCGCAACAGCG
TGTGGCGGGAGAAATCAAGCAAGATTTAACGCAAACCTTTCCTATGCACCGCCTGCTGCAAGGTGATGTCGGCAGCGGTA
AAACCATTGTCGCCGCATTGTCCGCACTCACCGCCATCGAGGCCGGCGCACAAGTAGCGGTGATGGCACCGACCGAAATT
TTGGCCGAACAACACTTTATTAAGTTCAAGCAATGGTTTGAGCCGCTGGGTTTGACCGTAGCTTGGCTTTCCGGCAGCCG
GCGCAAAAAAGAAAAAGACAGCAACAAAACCGCCATTTCAGACGGCCTTGCCCAAATCGCCGTCGGCACACATGCGCTGT
TTCAAGACGATGTCGTTTTCCACAATCTCGGCTTGGTGATTGTCGATGAACAACACCGCTTCGGCGTGGCGCAACGTTTG
GCCTTAAAAAACAAAGGCAACGACGTGCATCAACTGATGATGTCGGCTACCCCGATTCCGCGCACGCTGGCGATGAGTTT
TTTCGCTGATTTGGACGTGTCGGTCATCGACGAATTGCCGCCCAACCGCACGCCGATTAAAACGCGGCTGGTGAATAGTG
TACGCCGCGCCGAAGTCGAAGGGCTGGTGTTGGGTACTTGTCAAAAAGGGCAGCAGGCGTATTGGGTGTGTCCGCTGATT
GAAGAGAGCGAAACGCTGCAACTGCAAACCGCCGTCGATACTCTGGCCGAGCTTCAGACGGCCTTACCCGAACTCAATAT
CGGCTTGGTTCACGGCCGCATGAAACCCGCCGAAAAAGCCGAAGTGATGGCCGGATTTATCGCAGGCCGTCTGAATGTGT
TGGTGGCGACGACCGTGATTGAAGTCGGCGTCGATGTGCCCAATGCCAGCCTGATGGTGATTGAACACGCCGAACGCATG
GGCTTGGCGCAACTGCATCAATTACGCGGCCGTGTCGGACGGGGTGCCGCCGCCAGCACCTGCGTGCTGCTGTTTACCGA
GCCTTTGAGCGAACTGGCCAAAGCACGCCTGAAAGTGATTTACGAACACACCGACGGCTTCGAAATTGCCCGTCAAGACT
TGAATATCCGCGGCCCCGGCGAATTTTTAGGCGCACGCCAAAGCGGCGTACCCATGTTGCGGTTTGCCAATCTGGAAGAA
GATTTGCACCTGCTGGAACAAGCCCGCGAAATCGCGCCGAAACTGATTGCCGAACGGCCGGACATCGTGCGGGCGCATTT
GGATCGGTGGTTGGGCAGTCGGGAAGGGTATTTGGGGGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(284-421)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-664)

RecG wedge domain (RecG_wedge)

(11-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

84.265

100

0.843