Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H4O27_RS09155 Genome accession   NZ_CP062976
Coordinates   1880453..1880980 (+) Length   175 a.a.
NCBI ID   WP_165008258.1    Uniprot ID   -
Organism   Neisseria yangbaofengii strain ZJ785     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1875453..1885980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H4O27_RS09140 - 1876148..1877368 (+) 1221 WP_165008252.1 aspartate kinase -
  H4O27_RS13185 - 1877751..1877921 (+) 171 Protein_1782 phasyl DNA replicon protein arp -
  H4O27_RS09145 - 1878078..1879340 (-) 1263 WP_193004249.1 Glu/Leu/Phe/Val dehydrogenase -
  H4O27_RS09150 - 1879722..1880441 (+) 720 WP_165008256.1 phosphoglycolate phosphatase -
  H4O27_RS09155 recX 1880453..1880980 (+) 528 WP_165008258.1 recombination regulator RecX Regulator
  H4O27_RS09160 - 1881055..1881222 (+) 168 WP_165008260.1 hypothetical protein -
  H4O27_RS09165 lptG 1881286..1882356 (-) 1071 WP_165008262.1 LPS export ABC transporter permease LptG -
  H4O27_RS09170 lptF 1882353..1883468 (-) 1116 WP_165008264.1 LPS export ABC transporter permease LptF -
  H4O27_RS09175 - 1883691..1885100 (+) 1410 WP_165008266.1 leucyl aminopeptidase -
  H4O27_RS09180 - 1885202..1885642 (+) 441 WP_165008269.1 DNA polymerase III subunit chi -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 20271.67 Da        Isoelectric Point: 7.5197

>NTDB_id=492192 H4O27_RS09155 WP_165008258.1 1880453..1880980(+) (recX) [Neisseria yangbaofengii strain ZJ785]
MYESESDGFIHFGGADGHQSKHPSKPQKSLRARAMDILSRQEISRAGLKRKLAPHAESEEELEKVLDEFAERNWQSDERY
AEAYIHSKSRQHGKLRLQQALAQQGIDAGISREFMPDKESELQTAIQVLRKKFKQPSRDLKEKQKQVRFLAYRGFDMGTI
QAALKSDWSEDDDFY

Nucleotide


Download         Length: 528 bp        

>NTDB_id=492192 H4O27_RS09155 WP_165008258.1 1880453..1880980(+) (recX) [Neisseria yangbaofengii strain ZJ785]
ATGTACGAATCCGAAAGCGACGGCTTTATCCACTTCGGCGGCGCTGATGGCCACCAATCCAAACACCCGAGCAAACCGCA
GAAATCCTTGCGGGCACGGGCGATGGATATTTTATCGCGCCAAGAAATCAGCCGTGCCGGCCTGAAACGCAAGCTCGCTC
CGCATGCTGAAAGCGAAGAAGAATTGGAAAAAGTGTTGGACGAATTTGCCGAACGCAATTGGCAATCGGACGAGCGCTAC
GCCGAAGCCTACATCCACAGCAAAAGCCGCCAACACGGCAAATTGCGCTTGCAGCAGGCTTTGGCGCAGCAAGGCATTGA
CGCCGGCATCAGCCGCGAATTCATGCCTGATAAAGAAAGCGAACTGCAAACCGCGATTCAGGTTTTACGCAAAAAATTCA
AGCAGCCGAGCCGTGATTTGAAAGAGAAACAAAAGCAGGTGCGCTTTCTCGCTTACCGCGGTTTCGACATGGGCACGATT
CAAGCGGCCTTAAAAAGCGATTGGTCGGAAGATGACGACTTTTATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(53-166)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

77.551

84

0.651