Detailed information
Bioinformatically predicted
Overview
| Name | recB | Type | Machinery gene |
| Locus tag | H4O27_RS04880 | Genome accession | NZ_CP062976 |
| Coordinates | 1019624..1023247 (-) | Length | 1207 a.a. |
| NCBI ID | WP_165007960.1 | Uniprot ID | - |
| Organism | Neisseria yangbaofengii strain ZJ785 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1014624..1028247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4O27_RS04860 | glyA | 1016628..1017878 (-) | 1251 | WP_165007951.1 | serine hydroxymethyltransferase | - |
| H4O27_RS04865 | - | 1018022..1018381 (-) | 360 | WP_165007953.1 | hypothetical protein | - |
| H4O27_RS04870 | - | 1018374..1019117 (-) | 744 | WP_165007956.1 | nitroreductase family protein | - |
| H4O27_RS04875 | - | 1019349..1019570 (+) | 222 | WP_165007958.1 | YdcH family protein | - |
| H4O27_RS04880 | recB | 1019624..1023247 (-) | 3624 | WP_165007960.1 | exodeoxyribonuclease V subunit beta | Machinery gene |
| H4O27_RS04885 | - | 1023348..1024301 (-) | 954 | WP_308806043.1 | Dyp-type peroxidase | - |
| H4O27_RS04890 | - | 1024393..1025478 (+) | 1086 | WP_165007964.1 | metallophosphoesterase | - |
| H4O27_RS04895 | - | 1025534..1026649 (-) | 1116 | WP_165007966.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 1207 a.a. Molecular weight: 136164.13 Da Isoelectric Point: 4.8188
>NTDB_id=492178 H4O27_RS04880 WP_165007960.1 1019624..1023247(-) (recB) [Neisseria yangbaofengii strain ZJ785]
MSRSVHAFAPLSIPIRGTNLIEASAGTGKTYGIAALFTRLIVLEKMPVDKVLVVTFTKAATAELKTRLRARLDEVLQALE
SVDNAAGDSDGLNQYCEREHPGDVFLKGLLQKALEQESQARLIVRLKAAVGDFDNASIYTIHGFCQRVLRDFAFLCQTQF
DVELTDDSRERLLVPAQDFWRKRVSNNPQLAKLVFKHQYTPQNMLAEMQSFTCRPYLRFRRPESLLAESQQNAARTWADV
KANLPKLEETFWRIHPNLNGNSYRTDTFQELFNRLKHAAEQDYLPKNHDKLPMFGADVLGGKAKKGQSLDAAALADLQML
ANLGRDLTQAAAEEENALTLLKLDLLDYIDQALAEQKKSRRERTFDDLLLDVSDALQPANPHAQALAEAVASTWQVALID
EFQDTDPLQYRIFSEIFIRQNKPLFLVGDPKQAIYSFRGADIYAYLQAAEDAQQHYTLATNFRSHAKLINGIGALFRCKN
RPFVLENIDYNPVGAAREESRLSPSRPAVQVRWLHGDETEPLNKDALRKRAAGYCADEIAFALNEAAEGRLNFKGQPLEQ
GNIAVLVRTHNEGSMIAQALKSRRIQSVLLHRESVFASPEAQGLAALLDFWLNPHRTESLRFALSSVLFGYDADALYALN
QSEADLLAWIESAEHAARQWQQKGIYTAMQYFSAKHGIETRLLSDGNDRSLTNYHQLLERLSEENEQNRSPALLHQWLLA
QIDLAENGDKSESNVLRLESDDALVKIVTMHAAKGLQYPLVYCPFVWDAQDNKAHDWQILHRDGGESELLAKHQLDNDDR
TQLADEEMAERLRLLYVALTRAEEQLNIYAAYCQDTDDNTFAYLLEGRADSTREAVQAAYESERKAGKGVAEMAMLKNNW
ITFIDGQAENENTDFTFTEDTPLSAAYHSGQQTDVQYQAADIPPRDFEYIRHTSFTGLSRRVKAYDSEHEELQPGLDAAE
SNIRPSENVIEESDDNELSIHHFPRGTNAGLCLHDMLENLDFQSPAAEQSKQILETLTRYGFEDKWLPAVMALLDCCRET
PVSGKDTLSDIPADERLPEMGFTLYMQDFNLAALRAWFARPHLGLPPECIEAAQRLDFQDVQGYLTGFIDMTCIASDGQV
CVIDYKSNYLGGSTAAYTLQAMNEAVGEHHYYLQALIYAIAVGRYFKLRGLALPQIAVRYLFLRGMDGPENGIWSWDIDA
EDLADWV
MSRSVHAFAPLSIPIRGTNLIEASAGTGKTYGIAALFTRLIVLEKMPVDKVLVVTFTKAATAELKTRLRARLDEVLQALE
SVDNAAGDSDGLNQYCEREHPGDVFLKGLLQKALEQESQARLIVRLKAAVGDFDNASIYTIHGFCQRVLRDFAFLCQTQF
DVELTDDSRERLLVPAQDFWRKRVSNNPQLAKLVFKHQYTPQNMLAEMQSFTCRPYLRFRRPESLLAESQQNAARTWADV
KANLPKLEETFWRIHPNLNGNSYRTDTFQELFNRLKHAAEQDYLPKNHDKLPMFGADVLGGKAKKGQSLDAAALADLQML
ANLGRDLTQAAAEEENALTLLKLDLLDYIDQALAEQKKSRRERTFDDLLLDVSDALQPANPHAQALAEAVASTWQVALID
EFQDTDPLQYRIFSEIFIRQNKPLFLVGDPKQAIYSFRGADIYAYLQAAEDAQQHYTLATNFRSHAKLINGIGALFRCKN
RPFVLENIDYNPVGAAREESRLSPSRPAVQVRWLHGDETEPLNKDALRKRAAGYCADEIAFALNEAAEGRLNFKGQPLEQ
GNIAVLVRTHNEGSMIAQALKSRRIQSVLLHRESVFASPEAQGLAALLDFWLNPHRTESLRFALSSVLFGYDADALYALN
QSEADLLAWIESAEHAARQWQQKGIYTAMQYFSAKHGIETRLLSDGNDRSLTNYHQLLERLSEENEQNRSPALLHQWLLA
QIDLAENGDKSESNVLRLESDDALVKIVTMHAAKGLQYPLVYCPFVWDAQDNKAHDWQILHRDGGESELLAKHQLDNDDR
TQLADEEMAERLRLLYVALTRAEEQLNIYAAYCQDTDDNTFAYLLEGRADSTREAVQAAYESERKAGKGVAEMAMLKNNW
ITFIDGQAENENTDFTFTEDTPLSAAYHSGQQTDVQYQAADIPPRDFEYIRHTSFTGLSRRVKAYDSEHEELQPGLDAAE
SNIRPSENVIEESDDNELSIHHFPRGTNAGLCLHDMLENLDFQSPAAEQSKQILETLTRYGFEDKWLPAVMALLDCCRET
PVSGKDTLSDIPADERLPEMGFTLYMQDFNLAALRAWFARPHLGLPPECIEAAQRLDFQDVQGYLTGFIDMTCIASDGQV
CVIDYKSNYLGGSTAAYTLQAMNEAVGEHHYYLQALIYAIAVGRYFKLRGLALPQIAVRYLFLRGMDGPENGIWSWDIDA
EDLADWV
Nucleotide
Download Length: 3624 bp
>NTDB_id=492178 H4O27_RS04880 WP_165007960.1 1019624..1023247(-) (recB) [Neisseria yangbaofengii strain ZJ785]
ATGTCCCGTTCCGTTCACGCTTTTGCGCCGCTGTCGATTCCCATCCGAGGCACCAACCTGATTGAAGCATCCGCCGGCAC
CGGCAAAACTTACGGCATCGCCGCCCTGTTTACCCGTTTGATTGTGTTGGAAAAAATGCCGGTAGATAAAGTGTTGGTAG
TGACCTTCACCAAAGCCGCCACCGCCGAGCTCAAAACCCGTCTGCGCGCGCGCTTGGACGAAGTGTTGCAAGCCTTGGAA
AGCGTGGACAATGCTGCCGGAGATTCAGACGGCCTCAACCAATATTGCGAACGCGAACACCCCGGAGATGTGTTTCTCAA
AGGCTTGCTGCAAAAAGCGTTAGAACAAGAAAGCCAAGCACGCTTAATCGTGCGCCTGAAAGCCGCCGTCGGCGATTTCG
ACAATGCTTCGATTTACACCATTCACGGCTTTTGCCAGCGTGTGCTGCGTGATTTCGCCTTTTTGTGCCAAACGCAATTT
GATGTCGAGCTTACCGACGACAGCCGCGAGCGTTTGCTGGTGCCTGCACAGGATTTTTGGCGTAAGCGCGTGAGCAATAA
CCCGCAATTGGCCAAGCTGGTTTTCAAACACCAATACACGCCGCAAAACATGTTGGCCGAGATGCAAAGCTTTACCTGCC
GCCCGTATTTGCGTTTCAGACGGCCCGAAAGCCTTTTGGCCGAATCGCAGCAAAACGCTGCCCGGACATGGGCGGACGTC
AAAGCCAATCTGCCCAAACTGGAAGAAACTTTTTGGCGGATTCACCCCAATCTGAACGGCAACAGCTACCGAACCGACAC
TTTCCAAGAATTGTTCAACCGGCTCAAACACGCTGCCGAACAAGATTATCTGCCGAAAAATCACGACAAATTGCCGATGT
TCGGTGCAGACGTGTTGGGCGGCAAAGCCAAAAAAGGCCAAAGCCTTGATGCCGCCGCCCTGGCTGATTTGCAGATGCTG
GCCAATCTCGGGCGCGATTTGACCCAAGCCGCCGCAGAAGAAGAAAACGCCCTTACCCTGCTCAAACTCGACCTGCTGGA
CTATATCGACCAAGCCTTGGCCGAACAGAAAAAATCCCGCCGCGAACGCACGTTTGACGATTTGTTGTTAGATGTGTCCG
ACGCGCTGCAACCGGCCAATCCGCACGCCCAAGCCTTGGCCGAAGCGGTAGCATCTACTTGGCAAGTCGCCCTGATTGAC
GAATTCCAAGACACCGACCCGCTGCAATACCGGATTTTCAGTGAGATTTTTATCCGCCAAAACAAGCCGTTGTTTCTAGT
CGGCGACCCCAAGCAGGCGATTTACAGTTTCCGCGGTGCCGACATTTATGCCTATCTGCAGGCGGCGGAAGATGCGCAAC
AGCATTACACGCTGGCAACCAATTTCCGCAGCCATGCCAAGCTGATTAACGGCATTGGAGCGCTGTTCCGATGTAAAAAC
CGCCCGTTTGTGTTGGAAAATATTGATTACAACCCGGTCGGTGCGGCGCGTGAAGAAAGCCGTTTGTCACCAAGCCGCCC
TGCTGTTCAGGTACGTTGGCTGCACGGCGACGAAACCGAGCCGCTGAACAAAGATGCCTTGCGCAAACGTGCCGCCGGAT
ATTGCGCCGATGAAATCGCTTTTGCCTTAAACGAAGCGGCGGAAGGCCGTCTGAATTTCAAAGGGCAGCCGTTGGAACAG
GGCAACATTGCCGTATTGGTACGCACCCACAACGAAGGCAGCATGATTGCGCAAGCTTTGAAATCACGCCGCATCCAAAG
CGTATTACTGCACCGGGAATCCGTGTTCGCCTCGCCCGAAGCGCAAGGCTTGGCAGCTCTATTGGATTTCTGGCTCAATC
CGCACCGCACCGAATCACTGCGTTTTGCCTTAAGCAGCGTGCTGTTCGGCTACGATGCCGATGCACTTTACGCACTCAAC
CAAAGCGAAGCCGACCTGTTGGCGTGGATTGAGTCCGCCGAACACGCCGCCCGGCAATGGCAGCAAAAAGGCATTTACAC
CGCCATGCAGTATTTTTCTGCAAAACACGGCATCGAAACCCGACTTCTTTCAGACGGCAACGACCGCAGCCTGACCAATT
ATCATCAATTGCTGGAACGCTTATCCGAAGAAAACGAGCAAAACCGCAGCCCGGCATTGCTGCATCAATGGCTGTTGGCG
CAAATTGATCTGGCGGAAAACGGTGACAAAAGCGAAAGCAATGTTTTGCGCTTGGAAAGCGATGACGCCTTGGTCAAAAT
CGTGACCATGCACGCTGCCAAAGGTTTGCAATATCCACTGGTGTATTGCCCCTTTGTATGGGATGCGCAAGACAATAAAG
CACACGATTGGCAGATTCTGCACCGAGATGGCGGCGAAAGTGAATTGCTGGCCAAGCATCAGCTGGATAATGACGACCGC
ACCCAATTGGCTGACGAAGAAATGGCGGAACGTCTGCGCCTGCTCTATGTTGCCCTTACCCGCGCCGAAGAACAATTGAA
TATCTACGCTGCCTATTGCCAAGACACCGACGACAACACTTTCGCCTACTTGCTTGAAGGCCGTGCCGACAGCACGCGCG
AAGCCGTCCAAGCTGCTTATGAAAGCGAACGCAAAGCCGGAAAAGGCGTCGCAGAAATGGCCATGCTTAAAAACAATTGG
ATAACATTTATCGACGGTCAGGCCGAAAACGAAAATACCGACTTTACATTCACGGAAGATACGCCCCTCTCCGCCGCTTA
TCATTCAGGCCAACAAACCGATGTGCAATATCAGGCCGCCGACATTCCGCCGCGCGATTTCGAATACATCCGCCACACCA
GCTTCACCGGCTTGAGCCGCCGCGTCAAAGCGTACGACAGCGAACACGAAGAATTGCAACCGGGCTTGGATGCCGCAGAA
AGCAACATCAGGCCGTCTGAAAACGTGATTGAAGAAAGCGATGATAACGAATTGAGCATCCATCATTTTCCGCGCGGCAC
AAATGCCGGTTTGTGCCTGCACGATATGCTGGAAAACCTTGATTTCCAGAGCCCTGCCGCCGAACAAAGCAAACAGATTT
TGGAAACCTTAACCCGATACGGCTTTGAAGACAAATGGCTGCCTGCCGTGATGGCTCTGTTGGATTGTTGCCGCGAAACA
CCGGTTTCAGGCAAAGACACCTTGTCGGACATTCCGGCGGACGAGCGTTTACCCGAAATGGGCTTCACCTTGTATATGCA
AGATTTCAACCTTGCCGCATTACGCGCATGGTTTGCCCGGCCGCATTTGGGCTTGCCGCCGGAATGCATTGAAGCGGCGC
AAAGGCTGGATTTTCAAGATGTGCAAGGCTATCTCACCGGCTTTATCGACATGACCTGCATCGCTTCAGACGGCCAAGTC
TGCGTGATTGACTACAAATCCAATTACTTGGGCGGCAGCACAGCAGCCTACACCCTGCAAGCCATGAATGAAGCCGTGGG
TGAACACCACTATTACCTGCAAGCCCTGATTTACGCCATTGCCGTCGGCCGCTATTTCAAATTGCGTGGACTTGCTTTGC
CACAAATTGCCGTGCGCTATCTTTTCTTGCGCGGCATGGACGGTCCGGAAAACGGCATTTGGTCGTGGGATATTGATGCA
GAAGATTTGGCAGATTGGGTATAA
ATGTCCCGTTCCGTTCACGCTTTTGCGCCGCTGTCGATTCCCATCCGAGGCACCAACCTGATTGAAGCATCCGCCGGCAC
CGGCAAAACTTACGGCATCGCCGCCCTGTTTACCCGTTTGATTGTGTTGGAAAAAATGCCGGTAGATAAAGTGTTGGTAG
TGACCTTCACCAAAGCCGCCACCGCCGAGCTCAAAACCCGTCTGCGCGCGCGCTTGGACGAAGTGTTGCAAGCCTTGGAA
AGCGTGGACAATGCTGCCGGAGATTCAGACGGCCTCAACCAATATTGCGAACGCGAACACCCCGGAGATGTGTTTCTCAA
AGGCTTGCTGCAAAAAGCGTTAGAACAAGAAAGCCAAGCACGCTTAATCGTGCGCCTGAAAGCCGCCGTCGGCGATTTCG
ACAATGCTTCGATTTACACCATTCACGGCTTTTGCCAGCGTGTGCTGCGTGATTTCGCCTTTTTGTGCCAAACGCAATTT
GATGTCGAGCTTACCGACGACAGCCGCGAGCGTTTGCTGGTGCCTGCACAGGATTTTTGGCGTAAGCGCGTGAGCAATAA
CCCGCAATTGGCCAAGCTGGTTTTCAAACACCAATACACGCCGCAAAACATGTTGGCCGAGATGCAAAGCTTTACCTGCC
GCCCGTATTTGCGTTTCAGACGGCCCGAAAGCCTTTTGGCCGAATCGCAGCAAAACGCTGCCCGGACATGGGCGGACGTC
AAAGCCAATCTGCCCAAACTGGAAGAAACTTTTTGGCGGATTCACCCCAATCTGAACGGCAACAGCTACCGAACCGACAC
TTTCCAAGAATTGTTCAACCGGCTCAAACACGCTGCCGAACAAGATTATCTGCCGAAAAATCACGACAAATTGCCGATGT
TCGGTGCAGACGTGTTGGGCGGCAAAGCCAAAAAAGGCCAAAGCCTTGATGCCGCCGCCCTGGCTGATTTGCAGATGCTG
GCCAATCTCGGGCGCGATTTGACCCAAGCCGCCGCAGAAGAAGAAAACGCCCTTACCCTGCTCAAACTCGACCTGCTGGA
CTATATCGACCAAGCCTTGGCCGAACAGAAAAAATCCCGCCGCGAACGCACGTTTGACGATTTGTTGTTAGATGTGTCCG
ACGCGCTGCAACCGGCCAATCCGCACGCCCAAGCCTTGGCCGAAGCGGTAGCATCTACTTGGCAAGTCGCCCTGATTGAC
GAATTCCAAGACACCGACCCGCTGCAATACCGGATTTTCAGTGAGATTTTTATCCGCCAAAACAAGCCGTTGTTTCTAGT
CGGCGACCCCAAGCAGGCGATTTACAGTTTCCGCGGTGCCGACATTTATGCCTATCTGCAGGCGGCGGAAGATGCGCAAC
AGCATTACACGCTGGCAACCAATTTCCGCAGCCATGCCAAGCTGATTAACGGCATTGGAGCGCTGTTCCGATGTAAAAAC
CGCCCGTTTGTGTTGGAAAATATTGATTACAACCCGGTCGGTGCGGCGCGTGAAGAAAGCCGTTTGTCACCAAGCCGCCC
TGCTGTTCAGGTACGTTGGCTGCACGGCGACGAAACCGAGCCGCTGAACAAAGATGCCTTGCGCAAACGTGCCGCCGGAT
ATTGCGCCGATGAAATCGCTTTTGCCTTAAACGAAGCGGCGGAAGGCCGTCTGAATTTCAAAGGGCAGCCGTTGGAACAG
GGCAACATTGCCGTATTGGTACGCACCCACAACGAAGGCAGCATGATTGCGCAAGCTTTGAAATCACGCCGCATCCAAAG
CGTATTACTGCACCGGGAATCCGTGTTCGCCTCGCCCGAAGCGCAAGGCTTGGCAGCTCTATTGGATTTCTGGCTCAATC
CGCACCGCACCGAATCACTGCGTTTTGCCTTAAGCAGCGTGCTGTTCGGCTACGATGCCGATGCACTTTACGCACTCAAC
CAAAGCGAAGCCGACCTGTTGGCGTGGATTGAGTCCGCCGAACACGCCGCCCGGCAATGGCAGCAAAAAGGCATTTACAC
CGCCATGCAGTATTTTTCTGCAAAACACGGCATCGAAACCCGACTTCTTTCAGACGGCAACGACCGCAGCCTGACCAATT
ATCATCAATTGCTGGAACGCTTATCCGAAGAAAACGAGCAAAACCGCAGCCCGGCATTGCTGCATCAATGGCTGTTGGCG
CAAATTGATCTGGCGGAAAACGGTGACAAAAGCGAAAGCAATGTTTTGCGCTTGGAAAGCGATGACGCCTTGGTCAAAAT
CGTGACCATGCACGCTGCCAAAGGTTTGCAATATCCACTGGTGTATTGCCCCTTTGTATGGGATGCGCAAGACAATAAAG
CACACGATTGGCAGATTCTGCACCGAGATGGCGGCGAAAGTGAATTGCTGGCCAAGCATCAGCTGGATAATGACGACCGC
ACCCAATTGGCTGACGAAGAAATGGCGGAACGTCTGCGCCTGCTCTATGTTGCCCTTACCCGCGCCGAAGAACAATTGAA
TATCTACGCTGCCTATTGCCAAGACACCGACGACAACACTTTCGCCTACTTGCTTGAAGGCCGTGCCGACAGCACGCGCG
AAGCCGTCCAAGCTGCTTATGAAAGCGAACGCAAAGCCGGAAAAGGCGTCGCAGAAATGGCCATGCTTAAAAACAATTGG
ATAACATTTATCGACGGTCAGGCCGAAAACGAAAATACCGACTTTACATTCACGGAAGATACGCCCCTCTCCGCCGCTTA
TCATTCAGGCCAACAAACCGATGTGCAATATCAGGCCGCCGACATTCCGCCGCGCGATTTCGAATACATCCGCCACACCA
GCTTCACCGGCTTGAGCCGCCGCGTCAAAGCGTACGACAGCGAACACGAAGAATTGCAACCGGGCTTGGATGCCGCAGAA
AGCAACATCAGGCCGTCTGAAAACGTGATTGAAGAAAGCGATGATAACGAATTGAGCATCCATCATTTTCCGCGCGGCAC
AAATGCCGGTTTGTGCCTGCACGATATGCTGGAAAACCTTGATTTCCAGAGCCCTGCCGCCGAACAAAGCAAACAGATTT
TGGAAACCTTAACCCGATACGGCTTTGAAGACAAATGGCTGCCTGCCGTGATGGCTCTGTTGGATTGTTGCCGCGAAACA
CCGGTTTCAGGCAAAGACACCTTGTCGGACATTCCGGCGGACGAGCGTTTACCCGAAATGGGCTTCACCTTGTATATGCA
AGATTTCAACCTTGCCGCATTACGCGCATGGTTTGCCCGGCCGCATTTGGGCTTGCCGCCGGAATGCATTGAAGCGGCGC
AAAGGCTGGATTTTCAAGATGTGCAAGGCTATCTCACCGGCTTTATCGACATGACCTGCATCGCTTCAGACGGCCAAGTC
TGCGTGATTGACTACAAATCCAATTACTTGGGCGGCAGCACAGCAGCCTACACCCTGCAAGCCATGAATGAAGCCGTGGG
TGAACACCACTATTACCTGCAAGCCCTGATTTACGCCATTGCCGTCGGCCGCTATTTCAAATTGCGTGGACTTGCTTTGC
CACAAATTGCCGTGCGCTATCTTTTCTTGCGCGGCATGGACGGTCCGGAAAACGGCATTTGGTCGTGGGATATTGATGCA
GAAGATTTGGCAGATTGGGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recB | Neisseria gonorrhoeae strain FA1090 |
60.181 |
100 |
0.605 |