Detailed information NTG0491973

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IMO23_RS08050
• Genome accession: NZ_CP062919
• Coordinates: 1672603..1673304 (+)
• Length: 233 a.a.
• NCBI ID: WP_195707742.1
• Uniprot ID: A0A7S8WGM3
• Organism: Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1667603..1678304

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMO23_RS08015 (IMO23_08015)	kdsB	1668126..1668887 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IMO23_RS08020 (IMO23_08020)	-	1668899..1669879 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
IMO23_RS08025 (IMO23_08025)	-	1669891..1670232 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IMO23_RS08030 (IMO23_08030)	-	1670250..1671023 (+)	774	WP_000497302.1	TatD family hydrolase	-
IMO23_RS08035 (IMO23_08035)	-	1671061..1671669 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IMO23_RS08040 (IMO23_08040)	-	1671679..1672233 (+)	555	WP_002057406.1	type II secretion system protein	-
IMO23_RS08045 (IMO23_08045)	xcpV	1672223..1672603 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
IMO23_RS08050 (IMO23_08050)	xcpW	1672603..1673304 (+)	702	WP_195707742.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IMO23_RS08055 (IMO23_08055)	gspK	1673304..1674263 (+)	960	WP_195707743.1	type II secretion system minor pseudopilin GspK	-
IMO23_RS08060 (IMO23_08060)	-	1674493..1675089 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
IMO23_RS08065 (IMO23_08065)	ung	1675140..1675853 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
IMO23_RS08070 (IMO23_08070)	-	1675850..1676974 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
IMO23_RS08075 (IMO23_08075)	tadA	1676981..1677484 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
IMO23_RS08080 (IMO23_08080)	-	1677554..1677997 (+)	444	WP_002057383.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26693.58 Da
• Isoelectric Point: 8.3291

>NTDB_id=491973 IMO23_RS08050 WP_195707742.1 1672603..1673304(+) (xcpW) [Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A]
MIKNKYIHIRSFSSHLAERSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILHFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=491973 IMO23_RS08050 WP_195707742.1 1672603..1673304(+) (xcpW) [Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCATCTTGCAGAACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAAATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACATTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A7S8WGM3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	97.425	100	0.974