Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   KIH05_RS10865 Genome accession   NZ_CP074585
Coordinates   2244321..2246582 (+) Length   753 a.a.
NCBI ID   WP_000166999.1    Uniprot ID   A0ABX6CG46
Organism   Acinetobacter baumannii strain ATCC 19606     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2239321..2251582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KIH05_RS10850 (KIH05_10820) - 2240884..2241618 (-) 735 WP_000774086.1 molecular chaperone -
  KIH05_RS10855 (KIH05_10825) - 2241707..2242232 (-) 526 Protein_2118 fimbrial protein -
  KIH05_RS10860 (KIH05_10830) - 2242722..2243012 (-) 291 WP_000794351.1 hypothetical protein -
  KIH05_RS10865 (KIH05_10835) uvrA 2244321..2246582 (+) 2262 WP_000166999.1 ATP-binding cassette domain-containing protein Machinery gene
  KIH05_RS10870 (KIH05_10840) adeB 2246730..2249840 (-) 3111 WP_000987607.1 multidrug efflux RND transporter permease subunit AdeB -
  KIH05_RS10875 (KIH05_10845) adeA 2249837..2251027 (-) 1191 WP_001169091.1 multidrug efflux RND transporter periplasmic adaptor subunit AdeA -

Sequence

Protein


Download         Length: 753 a.a.        Molecular weight: 84627.98 Da        Isoelectric Point: 7.7931

>NTDB_id=491706 KIH05_RS10865 WP_000166999.1 2244321..2246582(+) (uvrA) [Acinetobacter baumannii strain ATCC 19606]
MTKRTINIYGARQNNLKNISLKIPKHKIVVFTGVSGSGKSSLVFETIGAEAQRQINETQDSFVRNRLQHFGVTDVDKIEN
LNVPVIINQKPLTGNIRSTVATITDIYANLRLLFSRMGEPFVGYSNVFSFNHPNGMCPQCEGIGIEQTIDIYKILDLDKS
LNEEGAIDFPTYQPTAWRWTRYADSGYFDLDKKLKDYSEKEWDLFLYAPQHKPLNPTSKWRKTALYEGLIPRFERNFLKG
EAQERNRYRNKLERIITIKECSLCKGQRLNQKSLSCKINGKNIAECTALSVSSLLEFLESIKSEKFETVLHEIKNKLNNL
NLVGLSYLNLNRVSNTLSGGESQRIKMVKHLGNSLVDLLYIFDEPSIGLHPKDLDNIIKIIQKIRDKGNSVLLVEHDPDL
IRTADHVVDMGPLSGINGGEIIYQGTFEELKNSSGLTGAFFRRPNTYKKEPRMGNEWISIKNAHLFNLKNIDVDIPKNCL
TVITGVAGSGKSTLISKVLPQQYPETKVVDQSAITASIRSNLLTYLDLLDPIRQLFAKTNKVSAKLFSFNSEGACPQCKG
SGIERVELAFLDDIEMTCDVCHGSGYAPEVLKYLYKDKNIAEILKMTVAEASNFFEDRILQQQFNSLMSLGLDYIAIGQR
LNTFSGGERQRLKLTKQINETDNIFVLDEPSTGLHPSDTEKLISLLNNLVEKGNTIIVIEHNLDIISQADWIVDIGPLAG
DKGGELVFSGTVSGLLSAEKSLTGYYLKKYLEL

Nucleotide


Download         Length: 2262 bp        

>NTDB_id=491706 KIH05_RS10865 WP_000166999.1 2244321..2246582(+) (uvrA) [Acinetobacter baumannii strain ATCC 19606]
ATGACTAAAAGAACAATAAATATTTATGGTGCCAGACAAAATAACCTTAAAAATATTTCATTGAAGATTCCTAAACATAA
AATCGTTGTCTTTACTGGAGTCTCTGGTTCAGGTAAATCTTCTTTAGTTTTCGAGACTATTGGCGCAGAAGCTCAAAGAC
AAATTAATGAAACTCAAGATAGTTTTGTACGTAATCGCTTGCAACATTTTGGTGTTACTGACGTTGATAAAATTGAAAAT
TTAAATGTACCTGTGATTATTAATCAAAAACCTTTAACGGGCAATATTCGCTCAACTGTTGCAACAATTACAGATATTTA
TGCCAATCTTCGCTTGTTATTTTCACGTATGGGTGAGCCGTTTGTTGGATACTCCAATGTCTTTTCTTTTAATCACCCAA
ATGGCATGTGTCCACAATGCGAAGGTATTGGAATCGAGCAAACAATTGATATTTACAAAATATTAGATTTAGATAAATCC
TTAAATGAAGAAGGTGCTATAGACTTCCCTACTTATCAACCTACAGCATGGCGTTGGACGCGATATGCAGATTCAGGTTA
CTTTGATTTAGATAAAAAATTAAAAGATTATAGTGAAAAAGAATGGGACTTATTTTTGTATGCTCCTCAGCACAAGCCTT
TAAACCCGACAAGTAAATGGAGAAAAACCGCACTTTATGAAGGACTAATTCCCAGATTTGAGCGTAACTTTTTAAAAGGT
GAAGCACAGGAAAGAAATCGTTATAGAAATAAACTTGAGCGAATTATTACAATCAAAGAATGCTCCTTATGTAAGGGACA
ACGGCTAAATCAAAAATCCTTATCTTGTAAAATTAATGGTAAAAATATTGCGGAATGTACGGCCCTATCCGTATCAAGTC
TTTTAGAGTTTCTCGAATCGATAAAAAGTGAAAAATTTGAAACCGTTTTGCACGAAATAAAAAATAAACTCAATAACTTA
AATCTCGTTGGACTCAGCTATTTAAACCTTAACCGCGTCAGCAATACATTGTCGGGAGGAGAATCACAACGAATTAAAAT
GGTTAAACATTTGGGTAATAGTCTGGTTGACCTACTCTATATTTTTGATGAACCAAGTATTGGCCTGCACCCCAAAGATT
TAGATAATATTATTAAAATTATTCAAAAAATTAGAGATAAGGGAAATAGTGTTTTATTGGTTGAACATGATCCTGATCTT
ATTAGAACAGCTGATCATGTCGTTGATATGGGGCCTCTTTCTGGTATTAACGGCGGTGAAATTATTTACCAAGGAACTTT
TGAAGAGTTAAAAAATTCATCAGGTTTAACAGGAGCGTTTTTTAGAAGGCCAAATACCTATAAGAAAGAACCACGTATGG
GCAATGAATGGATTTCAATTAAAAATGCTCATTTATTCAATTTAAAAAATATTGATGTCGACATTCCTAAGAACTGTCTA
ACCGTTATTACAGGAGTCGCTGGTTCAGGAAAAAGCACATTAATAAGTAAAGTATTACCACAACAATATCCTGAAACAAA
AGTTGTTGATCAATCTGCAATTACTGCAAGTATTCGCTCAAATTTATTGACCTATCTTGACCTTCTTGATCCGATTCGTC
AGCTATTTGCAAAAACAAATAAAGTAAGTGCCAAGCTCTTTAGTTTTAATAGTGAAGGTGCTTGCCCTCAATGTAAGGGA
TCTGGTATCGAAAGGGTTGAACTTGCATTTTTAGATGATATTGAAATGACATGTGATGTTTGTCATGGTTCTGGATATGC
ACCTGAAGTTTTAAAATATCTTTATAAAGATAAAAATATTGCTGAAATTTTAAAAATGACGGTTGCAGAAGCAAGCAACT
TTTTTGAAGATCGAATTTTACAGCAACAATTTAATTCTTTGATGAGTTTGGGGCTAGACTACATTGCAATCGGCCAACGC
TTAAATACATTTTCGGGTGGTGAGCGTCAAAGGTTAAAACTCACAAAACAAATTAATGAAACAGATAATATTTTTGTATT
GGATGAACCGAGTACAGGTCTACACCCTTCTGATACTGAAAAACTAATTAGTTTATTAAATAACTTAGTTGAGAAAGGCA
ACACAATCATTGTGATTGAACACAACTTAGACATCATAAGTCAAGCCGACTGGATTGTTGATATTGGTCCTTTGGCGGGT
GACAAAGGTGGTGAATTGGTATTCTCAGGAACTGTTAGCGGTTTGCTTTCAGCAGAAAAATCTTTAACAGGTTATTATTT
GAAAAAATATTTAGAGCTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(468-671)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

34.917

100

0.361
  uvrA Streptococcus pneumoniae TIGR4

34.917

100

0.361
  uvrA Streptococcus pneumoniae D39

34.917

100

0.361