Detailed information NTG0049151

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: INV104_RS02865
• Genome accession: NC_017591
• Coordinates: 543433..543699 (+)
• Length: 88 a.a.
• NCBI ID: WP_001818764.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae INV104
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	542861..543355	543433..543699	flank	78

Gene organization within MGE regions

Location: 542861..543699

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INV104_RS02860 (INV104_04860)	-	542861..543349 (+)	489	Protein_555	transposase	-
INV104_RS02865 (INV104_04870)	HI0659	543433..543699 (+)	267	WP_001818764.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9627.08 Da
• Isoelectric Point: 4.2720

>NTDB_id=49151 INV104_RS02865 WP_001818764.1 543433..543699(+) (HI0659) [Streptococcus pneumoniae INV104]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGVSQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=49151 INV104_RS02865 WP_001818764.1 543433..543699(+) (HI0659) [Streptococcus pneumoniae INV104]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAGTGAGTCAACCTGTCATAGCTA
GGATGGAAACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	57.143	87.5	0.5