Detailed information NTG0491470

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: F7R26_RS02200
• Genome accession: NZ_CP062803
• Coordinates: 491674..492819 (-)
• Length: 381 a.a.
• NCBI ID: WP_193692114.1
• Uniprot ID: -
• Organism: Cupriavidus basilensis strain DSM 11853
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 486674..497819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7R26_RS02180 (F7R26_002175)	-	487690..489009 (-)	1320	WP_150989733.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
F7R26_RS02185 (F7R26_002180)	-	489369..490022 (-)	654	WP_150989735.1	ANTAR domain-containing response regulator	-
F7R26_RS02190 (F7R26_002185)	-	490231..490932 (+)	702	WP_150989738.1	fumarylacetoacetate hydrolase family protein	-
F7R26_RS02195 (F7R26_002190)	maiA	490937..491584 (+)	648	WP_150989741.1	maleylacetoacetate isomerase	-
F7R26_RS02200 (F7R26_002195)	pilA	491674..492819 (-)	1146	WP_193692114.1	signal recognition particle-docking protein FtsY	Machinery gene
F7R26_RS02205 (F7R26_002200)	-	492880..494409 (+)	1530	WP_150991850.1	M16 family metallopeptidase	-
F7R26_RS02210 (F7R26_002205)	-	494434..495795 (+)	1362	WP_150991848.1	M16 family metallopeptidase	-
F7R26_RS02215 (F7R26_002210)	rsmD	495873..496502 (+)	630	WP_183032820.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
F7R26_RS02220 (F7R26_002215)	coaD	496720..497208 (+)	489	WP_043343402.1	pantetheine-phosphate adenylyltransferase	-
F7R26_RS02225 (F7R26_002220)	-	497278..497538 (+)	261	WP_150991846.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40254.48 Da
• Isoelectric Point: 7.3637

>NTDB_id=491470 F7R26_RS02200 WP_193692114.1 491674..492819(-) (pilA) [Cupriavidus basilensis strain DSM 11853]
MFSFWKKRKAEPASAPPEVQSPAPAATPAAAPASAPPPIPAAGPAPAAAVPVPPTAIQPVRSAAPAAAEELVLTPPPAAS
AEAKRGWMQRLRTGLSKTSRNLGTLFVGVKVDEDLFEDLETALIMADAGVEATEHLLSALRRRVKTERIETAEGVKAALR
ELLTELLRPLEKTMSLGREQPLVMMISGVNGAGKTTSIGKLCKHFQSYDQSVLLAAGDTFRAAAREQLTIWGERNNVTVV
SQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVKRVIAKAMPNAPHESLLVIDANTGQNALSQVKA
FDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFADALLG

Nucleotide

• Length: 1146 bp

>NTDB_id=491470 F7R26_RS02200 WP_193692114.1 491674..492819(-) (pilA) [Cupriavidus basilensis strain DSM 11853]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAACCGGCCAGTGCGCCGCCCGAGGTGCAAAGCCCGGCGCCCGCCGCCAC
TCCGGCCGCGGCGCCCGCCAGCGCGCCCCCCCCCATTCCCGCGGCCGGGCCTGCCCCGGCCGCCGCCGTTCCCGTCCCGC
CAACCGCCATCCAGCCAGTCCGGAGTGCGGCTCCGGCCGCTGCCGAGGAACTGGTCCTGACCCCGCCGCCGGCCGCCTCC
GCCGAGGCCAAGCGCGGCTGGATGCAACGTTTGCGCACCGGCCTGTCCAAGACCAGCCGCAATCTGGGCACGCTGTTTGT
TGGCGTCAAGGTCGACGAAGACCTGTTCGAGGACCTGGAAACGGCCCTGATCATGGCCGACGCCGGCGTCGAGGCTACCG
AGCACCTGCTGAGCGCGCTGCGCCGCCGCGTCAAGACCGAACGCATCGAAACCGCCGAAGGCGTCAAGGCCGCGCTGCGC
GAGCTGCTGACCGAGCTGCTGCGCCCGCTCGAGAAGACCATGTCCCTGGGCCGCGAGCAGCCGCTGGTGATGATGATCTC
GGGGGTGAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGAGCTATGACCAGTCCGTGCTGC
TGGCCGCGGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGTTGACCATCTGGGGCGAGCGCAACAATGTCACGGTGGTC
TCGCAGGAAAGTGGCGACCCGGCGGCGGTGATCTTCGACGCGGTCAACGCGGCACGCGCACGCGGCATCGATATCGTGAT
GGCCGATACCGCGGGTCGCCTGCCCACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTCAAGCGTGTCATCGCCAAGG
CGATGCCGAACGCGCCACACGAATCGCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGTCCCAGGTCAAGGCG
TTCGACGACGCGCTGGGCCTGACCGGGCTGATCGTGACCAAGCTCGACGGCACCGCCAAGGGCGGTATCCTGGCCGCGAT
CGCGCGCCAGCGCCCGGTGCCGGTCTACTTCATCGGCGTGGGCGAGAAGGTCGAGGACCTGCAGCCCTTCAAGGCCGAGG
AATTCGCCGACGCACTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (105-161)

• SRP54-type protein, GTPase domain (SRP54) (182-381)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.404	100	0.572