Detailed information NTG0491446

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KIH94_RS01630
• Genome accession: NZ_CP074571
• Coordinates: 296406..297527 (+)
• Length: 373 a.a.
• NCBI ID: WP_015382685.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BYS2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 291406..302527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIH94_RS01610 (KIH94_01610)	-	292489..292620 (-)	132	WP_003246334.1	hypothetical protein	-
KIH94_RS01615 (KIH94_01615)	ycdB	292794..294215 (+)	1422	WP_015382683.1	YcdB/YcdC domain-containing protein	-
KIH94_RS01620 (KIH94_01620)	ycdC	294402..295763 (+)	1362	WP_046340299.1	YcdB/YcdC domain-containing protein	-
KIH94_RS01625 (KIH94_01625)	cwlK	295771..296283 (-)	513	WP_041517631.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
KIH94_RS01630 (KIH94_01630)	rapF	296406..297527 (+)	1122	WP_015382685.1	response regulator aspartate phosphatase RapJ	Regulator
KIH94_RS01635 (KIH94_01635)	ycdF	297635..298411 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
KIH94_RS01640 (KIH94_01640)	ycdG	298436..300121 (+)	1686	WP_015382687.1	alpha-glucosidase	-
KIH94_RS01645 (KIH94_01645)	znuA	300309..301268 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
KIH94_RS01650 (KIH94_01650)	znuC	301323..302018 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44444.30 Da
• Isoelectric Point: 4.7895

>NTDB_id=491446 KIH94_RS01630 WP_015382685.1 296406..297527(+) (rapF) [Bacillus subtilis strain BYS2]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSADEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=491446 KIH94_RS01630 WP_015382685.1 296406..297527(+) (rapF) [Bacillus subtilis strain BYS2]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGCCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGAGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGATGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405