Detailed information NTG0491297

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KHW16_RS06890
• Genome accession: NZ_CP074407
• Coordinates: 1481251..1482234 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain GDAR2-2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1476251..1487234

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHW16_RS06875 (KHW16_06845)	dppA	1477551..1479158 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
KHW16_RS06880 (KHW16_06850)	dppB	1479309..1480328 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KHW16_RS06885 (KHW16_06855)	dppC	1480338..1481240 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KHW16_RS06890 (KHW16_06860)	amiE	1481251..1482234 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
KHW16_RS06895 (KHW16_06865)	dppF	1482231..1483235 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KHW16_RS06900 (KHW16_06870)	yhjV	1483265..1484536 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
KHW16_RS06905 (KHW16_06875)	ldrD	1485012..1485119 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KHW16_RS06910 (KHW16_06880)	bcsG	1485206..1486885 (-)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
KHW16_RS06915 (KHW16_06885)	bcsF	1486882..1487073 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=491297 KHW16_RS06890 WP_001196486.1 1481251..1482234(+) (amiE) [Escherichia coli strain GDAR2-2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=491297 KHW16_RS06890 WP_001196486.1 1481251..1482234(+) (amiE) [Escherichia coli strain GDAR2-2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404