Detailed information NTG0491258

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KHA81_RS17740
• Genome accession: NZ_CP074391
• Coordinates: 3587219..3588349 (-)
• Length: 376 a.a.
• NCBI ID: WP_003151195.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain L-17
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3582219..3593349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHA81_RS19665	-	3582746..3583015 (-)	270	WP_015387582.1	hypothetical protein	-
KHA81_RS17710	-	3583062..3583466 (-)	405	WP_015387581.1	Rrf2 family transcriptional regulator	-
KHA81_RS17715	ureC	3583607..3585316 (-)	1710	WP_015387580.1	urease subunit alpha	-
KHA81_RS17720	ureB	3585313..3585687 (-)	375	WP_003151199.1	urease subunit beta	-
KHA81_RS17725	ureA	3585684..3586001 (-)	318	WP_003151198.1	urease subunit gamma	-
KHA81_RS17730	-	3586355..3586543 (-)	189	WP_003151197.1	CsbD family protein	-
KHA81_RS17735	-	3586617..3587096 (-)	480	WP_003151196.1	hypothetical protein	-
KHA81_RS17740	rapC	3587219..3588349 (-)	1131	WP_003151195.1	tetratricopeptide repeat protein	Regulator
KHA81_RS17745	moaA	3588540..3589565 (-)	1026	WP_015387579.1	GTP 3',8-cyclase MoaA	-
KHA81_RS17750	fdhD	3589583..3590371 (-)	789	WP_014306001.1	formate dehydrogenase accessory sulfurtransferase FdhD	-
KHA81_RS17755	-	3590466..3590630 (-)	165	WP_003151191.1	hypothetical protein	-
KHA81_RS17760	-	3590717..3591397 (-)	681	WP_015387578.1	VWA domain-containing protein	-
KHA81_RS17765	-	3591707..3592393 (-)	687	WP_003151188.1	VWA domain-containing protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44932.05 Da
• Isoelectric Point: 5.3221

>NTDB_id=491258 KHA81_RS17740 WP_003151195.1 3587219..3588349(-) (rapC) [Bacillus amyloliquefaciens strain L-17]
MTAYEIPSSQVGVKINKWYKHILAFQAADAIKLKEEIDEDIQRMEEDQLLLLYYQLISYRHHIMLDYVKPECTEQSQIQY
SELQKTIESTDSISGLSEYYFHLFRGMYEFDHNNYVAAISFYRKAEKLLSFVEDDIERAEFHFKMSEVFYVMKQTHFSMN
HGIQALDTYMKHDFYRVRRIQCHFVISGNYIDCKNYDKALEHLDEALRLSLLEGQPRLIGSSLYNLGNCYAEKRDLDEAA
RYFRKAVPVFEEHQLEQLPKALFSLTHTLFRLHDDQAALTYYERGIMIAKERGDRFSLEKYKFLQALYLESLNMDLIHEV
FDYMNEKSLYVYIEDFALEAAVYTSAHEQYKEAAYFYEKAIRMRENIQKEQCLYDI

Nucleotide

• Length: 1131 bp

>NTDB_id=491258 KHA81_RS17740 WP_003151195.1 3587219..3588349(-) (rapC) [Bacillus amyloliquefaciens strain L-17]
ATGACCGCATACGAGATTCCGTCATCTCAAGTTGGAGTCAAGATCAACAAATGGTACAAGCACATTTTAGCGTTTCAAGC
GGCTGATGCCATAAAGCTGAAAGAGGAAATTGATGAGGATATACAACGTATGGAGGAAGACCAGCTGCTGCTGTTATATT
ATCAGCTGATCAGCTACCGCCATCATATTATGCTTGATTACGTCAAGCCGGAATGCACCGAACAATCACAGATTCAGTAC
AGCGAGCTGCAAAAGACGATCGAAAGCACGGACAGCATATCGGGACTGTCTGAGTATTATTTCCATTTGTTCAGAGGGAT
GTATGAATTCGATCACAATAACTATGTTGCGGCTATTTCTTTTTACCGGAAAGCGGAAAAACTCCTTTCATTTGTCGAGG
ATGATATAGAGAGGGCGGAATTCCATTTCAAGATGTCTGAAGTGTTTTACGTCATGAAGCAGACTCATTTTTCCATGAAT
CACGGGATTCAGGCGCTGGATACGTATATGAAACACGATTTTTACAGAGTGCGGAGAATTCAATGCCATTTCGTCATTTC
AGGAAACTACATCGACTGCAAAAACTACGACAAAGCGCTTGAGCATTTAGACGAAGCCCTCCGCCTTTCTTTGCTTGAAG
GACAGCCCCGCCTGATCGGGTCTTCGCTTTACAATCTGGGGAATTGTTATGCTGAAAAGCGGGATCTGGATGAAGCGGCC
CGGTACTTTAGAAAAGCGGTTCCCGTTTTTGAAGAGCATCAGCTTGAACAGCTTCCGAAGGCGCTGTTCAGCTTAACGCA
CACCCTTTTCAGGCTGCATGATGACCAAGCGGCCCTCACCTATTATGAAAGAGGGATCATGATCGCGAAAGAACGCGGCG
ACCGATTCAGTTTAGAGAAGTATAAGTTTTTACAAGCGCTTTATTTGGAGTCACTCAATATGGATTTAATCCATGAAGTG
TTTGACTATATGAATGAAAAATCGCTGTATGTGTATATTGAAGATTTCGCCTTGGAGGCCGCCGTTTACACAAGCGCACA
TGAGCAATATAAAGAAGCGGCGTATTTTTATGAAAAAGCGATTCGCATGAGAGAAAACATTCAAAAAGAACAGTGTTTAT
ACGATATATAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Anaphase-promoting complex subunit 5 (ANAPC5) (314-373)

• Tetratricopeptide repeat (TPR_12) (192-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.842	100	0.423
rapF	Bacillus subtilis subsp. subtilis str. 168	40	99.734	0.399