Detailed information NTG0491237

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KHA81_RS14825
• Genome accession: NZ_CP074391
• Coordinates: 3018478..3019608 (-)
• Length: 376 a.a.
• NCBI ID: WP_015387807.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain L-17
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3013478..3024608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHA81_RS14805	-	3013831..3014676 (-)	846	WP_003152176.1	glucosaminidase domain-containing protein	-
KHA81_RS14810	hmpA	3014819..3015994 (-)	1176	WP_015387812.1	NO-inducible flavohemoprotein	-
KHA81_RS14815	-	3016212..3016853 (+)	642	WP_003152172.1	cupin domain-containing protein	-
KHA81_RS14820	-	3016906..3017226 (-)	321	WP_015387811.1	hypothetical protein	-
KHA81_RS19625	-	3017978..3018162 (+)	185	Protein_2874	hypothetical protein	-
KHA81_RS19745	-	3018218..3018343 (-)	126	WP_015387808.1	hypothetical protein	-
KHA81_RS14825	rapC	3018478..3019608 (-)	1131	WP_015387807.1	Rap family tetratricopeptide repeat protein	Regulator
KHA81_RS14830	-	3019927..3020130 (+)	204	WP_015387806.1	hypothetical protein	-
KHA81_RS19630	-	3020499..3020762 (+)	264	WP_015387805.1	hypothetical protein	-
KHA81_RS14845	-	3021140..3021970 (-)	831	WP_031306544.1	undecaprenyl-diphosphate phosphatase	-
KHA81_RS14850	-	3022062..3023222 (-)	1161	WP_015387803.1	AI-2E family transporter	-
KHA81_RS14855	-	3023402..3024388 (+)	987	WP_015387802.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44378.80 Da
• Isoelectric Point: 6.5102

>NTDB_id=491237 KHA81_RS14825 WP_015387807.1 3018478..3019608(-) (rapC) [Bacillus amyloliquefaciens strain L-17]
MSSVLPSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINEMEEDEYLLIYYTLMKFRHQLMLDYLEPVTTRVRPTIDE
LLEKIEASNKGISGLLCYYSLFFRGMYEFDQKQYVKAIGFYREAEKQLVHVHDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYEQYELYKVRKIQCLFVISGNYVDFKRFEKSLPHLEKALELSKQVNNNERLLSSAYYNIGKNYGDLEEYSKAE
IYLKKAAEISEKYKLGNLPHSLFTYAKLLFKQGKTSEAIQISKKGLSSAIYQGDKLFESLQKYLEALYINAIDQLGIKKT
IDYLEKNKNYSYVEDIALDTAAVYAESKQYDKSYFYHQKMIQTQKQIQRGECLYEF

Nucleotide

• Length: 1131 bp

>NTDB_id=491237 KHA81_RS14825 WP_015387807.1 3018478..3019608(-) (rapC) [Bacillus amyloliquefaciens strain L-17]
GTGAGTTCTGTTTTACCATCATCGGAGGTTGGCGTTAAGATTAATGAATGGTACAAAATGATACGTCAGTTCAGTGTTCC
GGATGCGGAGATTTTGAAAGCGGAAGTGGAACAAGAAATAAATGAGATGGAAGAAGACGAGTATCTACTGATTTACTACA
CCCTCATGAAATTCCGCCATCAGCTCATGCTGGATTATTTAGAACCGGTGACTACCCGTGTGAGACCGACAATTGACGAG
CTGCTGGAAAAAATCGAAGCATCAAATAAAGGAATTTCCGGCCTGCTGTGCTATTACTCTTTATTTTTCCGCGGCATGTA
TGAATTTGATCAAAAGCAGTATGTAAAGGCGATCGGCTTTTATAGAGAGGCTGAAAAACAACTCGTTCATGTGCATGATG
AAATTGAGAGAGCGGAATTTCATTTTAAACTGGCTGAAGCATATTACGGTATGAAACAAAGCCACGTCTCTATGCATCAC
GTAAAGCAAGCACTCGATATTTACGAGCAGTATGAGTTGTATAAAGTCCGGAAAATTCAATGTCTATTCGTCATCTCTGG
GAATTATGTTGACTTTAAACGCTTTGAAAAAAGTTTGCCTCATTTAGAAAAAGCTTTAGAGTTGTCGAAACAAGTAAACA
ATAATGAAAGGCTGCTCAGTTCTGCTTATTACAACATAGGAAAGAATTACGGAGACCTAGAAGAATACAGTAAAGCTGAA
ATCTACTTAAAAAAAGCAGCGGAGATATCTGAAAAGTATAAATTGGGTAACCTTCCGCATTCCTTGTTTACATACGCAAA
GCTTCTATTTAAACAAGGGAAAACAAGCGAGGCGATTCAAATCAGTAAAAAGGGACTTTCATCAGCGATATATCAAGGGG
ATAAGCTGTTTGAATCTCTGCAAAAATATTTGGAGGCTTTATATATTAATGCAATAGACCAATTGGGAATCAAAAAAACA
ATTGATTACCTTGAGAAAAATAAAAACTATTCGTATGTAGAAGATATTGCTCTTGATACGGCTGCTGTTTATGCAGAATC
AAAGCAATATGACAAATCTTATTTTTATCATCAAAAAATGATTCAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (193-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.591	100	0.449
rapF	Bacillus subtilis subsp. subtilis str. 168	40.106	100	0.404