Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KGS77_RS14270 Genome accession   NZ_CP074380
Coordinates   3287429..3289162 (-) Length   577 a.a.
NCBI ID   WP_242581466.1    Uniprot ID   -
Organism   Streptomyces sp. MST-110588     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3282429..3294162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGS77_RS14255 (KGS77_14145) - 3283506..3284177 (-) 672 Protein_2851 response regulator transcription factor -
  KGS77_RS14260 (KGS77_14150) - 3284506..3285413 (+) 908 Protein_2852 alpha/beta fold hydrolase -
  KGS77_RS14265 (KGS77_14155) rcrQ 3285471..3287372 (-) 1902 WP_242587468.1 ABC transporter ATP-binding protein Regulator
  KGS77_RS14270 (KGS77_14160) rcrP 3287429..3289162 (-) 1734 WP_242581466.1 ABC transporter ATP-binding protein Regulator
  KGS77_RS14275 (KGS77_14165) - 3289447..3289692 (+) 246 WP_277994321.1 MoaD/ThiS family protein -
  KGS77_RS14280 - 3289702..3291324 (+) 1623 WP_347404491.1 hypothetical protein -
  KGS77_RS14285 (KGS77_14175) - 3291499..3292209 (+) 711 WP_242581468.1 DUF2993 domain-containing protein -
  KGS77_RS14290 (KGS77_14180) - 3292934..3293773 (+) 840 WP_242581469.1 sulfurtransferase -
  KGS77_RS14295 (KGS77_14185) - 3293830..3294117 (+) 288 WP_242581470.1 DUF1416 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62714.10 Da        Isoelectric Point: 6.6208

>NTDB_id=491089 KGS77_RS14270 WP_242581466.1 3287429..3289162(-) (rcrP) [Streptomyces sp. MST-110588]
MLVRLARAHLRPHRRSISLIVLLQLIQTLATLYLPTLNADIIDDGVVKGDTGYILTLGGLMVAVTLLQILCAIGAVFYGA
RTAMALGRDVRAAVFDRVQSFSAREVGTFGAPSLITRTTNDVQQVQMLVLMTFTMMVAAPIMCVGGVVMALNQDVPLSGL
LLVVVPVLAVLVSLIVRRMRPLFRGVQQRIDTVNRVLREQISGIRVIRAFVRDRHEQERFAAANTDLFEISVRAGRLMSM
MFPLVMLIVNLSSVAVVWFAGHRIDSGDMQIGALTAFLSYLMYIFMSIMMATFMVMMLPRAEVCAERIQEVLATDTSVTP
PQRPVTALRRHGELELRGVGFRFPGAEEPVLKDVSLIARPGETTAVIGSTGSGKSTLLGLVPRLFDATEGAVLVDGEDVR
GLDPQTLSTAVGLVPQKPYLFSGTVASNLRYGNPDATDEELWHALETAQARDFVEKLEGGLAAPIAQGGGNVSGGQRQRL
AIARALVRKPEIYLFDDSFSALDYATDAALRAALAQETREATVVIVAQRVSTIRGADRIVVLDEGRVVGTGTHTELMADN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=491089 KGS77_RS14270 WP_242581466.1 3287429..3289162(-) (rcrP) [Streptomyces sp. MST-110588]
GTGTTGGTCCGACTCGCGCGGGCGCATCTGCGGCCCCATAGGCGCTCTATATCCTTGATCGTCCTGCTTCAGCTCATACA
GACGCTGGCCACCCTCTACCTGCCCACTCTCAACGCCGACATCATCGACGACGGTGTGGTCAAGGGGGACACCGGCTACA
TCCTGACCCTGGGCGGCCTGATGGTCGCCGTCACCCTGCTGCAGATCCTCTGCGCGATCGGCGCCGTCTTCTACGGCGCG
CGGACCGCGATGGCCCTGGGACGGGACGTCCGGGCCGCCGTGTTCGACCGTGTCCAGTCCTTCTCCGCCCGCGAGGTGGG
GACCTTCGGCGCACCTTCCCTGATCACCCGCACCACCAACGACGTCCAGCAGGTCCAGATGCTGGTGCTGATGACGTTCA
CGATGATGGTCGCGGCGCCGATCATGTGTGTCGGCGGTGTGGTGATGGCGCTCAACCAGGACGTGCCGCTGTCCGGCCTG
CTCCTGGTCGTCGTCCCGGTCCTGGCGGTCCTGGTGTCGCTGATCGTACGGAGGATGCGCCCGCTGTTCCGCGGTGTGCA
GCAGCGCATCGACACCGTCAACCGCGTGCTGCGCGAGCAGATCAGCGGTATCCGCGTCATCCGCGCCTTCGTCCGTGACC
GGCACGAGCAGGAGCGGTTCGCCGCCGCCAACACCGACCTGTTCGAGATATCCGTGCGGGCCGGGCGGCTGATGTCGATG
ATGTTCCCGCTGGTCATGCTGATCGTGAACCTCTCCAGCGTGGCCGTGGTCTGGTTCGCCGGGCACCGCATCGACAGCGG
TGACATGCAGATCGGCGCGCTGACCGCCTTCCTCAGCTACCTCATGTACATCTTCATGTCGATCATGATGGCGACGTTCA
TGGTCATGATGCTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCCAGGAAGTGCTGGCCACGGACACCAGCGTCACCCCG
CCACAGCGGCCGGTCACCGCGCTGCGCCGGCACGGCGAACTGGAGCTGCGGGGCGTGGGCTTCCGCTTCCCCGGCGCCGA
GGAGCCGGTCCTCAAGGACGTCTCCCTGATCGCCCGGCCCGGCGAGACCACCGCCGTCATCGGCTCCACCGGCAGCGGCA
AGTCCACCCTTCTGGGGCTGGTTCCGCGTCTGTTCGACGCGACGGAGGGCGCGGTGCTGGTGGACGGCGAGGACGTACGC
GGGCTGGACCCGCAGACGCTGTCCACCGCCGTCGGCCTCGTACCGCAAAAGCCGTACCTCTTCTCCGGGACCGTGGCGTC
CAATCTGCGCTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCCCTGGAGACCGCCCAGGCACGCGACTTCG
TCGAGAAGCTGGAAGGCGGCCTGGCGGCGCCCATCGCCCAGGGCGGCGGCAATGTCTCCGGCGGTCAGCGGCAGCGGCTG
GCCATCGCCCGCGCGCTGGTGCGCAAGCCCGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTGGACTACGCCACCGA
CGCGGCGCTGCGGGCCGCGCTGGCCCAGGAGACCCGGGAGGCGACCGTCGTGATCGTCGCGCAGCGGGTCTCCACCATCC
GGGGCGCCGACCGGATCGTCGTCCTGGACGAGGGCCGGGTCGTGGGCACCGGTACCCACACCGAACTGATGGCGGACAAC
GAGACGTACCGGGAGATCGTCCTGTCCCAGCTCACCGAACAGGAGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(19-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.619

95.147

0.386