Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KGS77_RS14265 Genome accession   NZ_CP074380
Coordinates   3285471..3287372 (-) Length   633 a.a.
NCBI ID   WP_242587468.1    Uniprot ID   -
Organism   Streptomyces sp. MST-110588     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3280471..3292372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGS77_RS14245 (KGS77_14135) - 3280650..3281816 (-) 1167 WP_242581464.1 trypsin-like peptidase domain-containing protein -
  KGS77_RS14250 (KGS77_14140) - 3281959..3282984 (-) 1026 WP_242581465.1 LacI family DNA-binding transcriptional regulator -
  KGS77_RS14255 (KGS77_14145) - 3283506..3284177 (-) 672 Protein_2851 response regulator transcription factor -
  KGS77_RS14260 (KGS77_14150) - 3284506..3285413 (+) 908 Protein_2852 alpha/beta fold hydrolase -
  KGS77_RS14265 (KGS77_14155) rcrQ 3285471..3287372 (-) 1902 WP_242587468.1 ABC transporter ATP-binding protein Regulator
  KGS77_RS14270 (KGS77_14160) rcrP 3287429..3289162 (-) 1734 WP_242581466.1 ABC transporter ATP-binding protein Regulator
  KGS77_RS14275 (KGS77_14165) - 3289447..3289692 (+) 246 WP_277994321.1 MoaD/ThiS family protein -
  KGS77_RS14280 - 3289702..3291324 (+) 1623 WP_347404491.1 hypothetical protein -
  KGS77_RS14285 (KGS77_14175) - 3291499..3292209 (+) 711 WP_242581468.1 DUF2993 domain-containing protein -

Sequence

Protein


Download         Length: 633 a.a.        Molecular weight: 68284.86 Da        Isoelectric Point: 6.3643

>NTDB_id=491088 KGS77_RS14265 WP_242587468.1 3285471..3287372(-) (rcrQ) [Streptomyces sp. MST-110588]
MGGQPTEKSMDFKGSGKRLLREMRPERGIMAVALALGALSVALSVIGPKVLGHATDLIMAGIVGRRLPEGITKAQAVAHL
RDRGQDGLADMLGTMPVVPGQGIDFGAVGVVLLWVTLIYVGASVFGFVQARIATFVVQRAVFRLRERVEHKLSRLPLSYF
DKQPRGEVLSRATNDIDNIQQTLQQTLSQIVTSLLTILGVLVMMFWISPLLALVALVTVPVSVVVATKVGKRAQPQFVQQ
WKTTGKLNAHIEEMYTGHALVKVFGRQKESAALFREQNEALYQAGFKAQFISGIIQPAMMFIGNLNYVLVAVVGGLRVAS
GALSIGDVQAFIQYSRQFSQPLTQVASMANLVQSGVASAERVFELLDAPEQAPEAAEPVRPEHVRGRVEFEEVSFSYQAD
KPLIENLSLSVRPGQTVAIVGPTGAGKTTLVNLLMRFYEVGGGRITLDGVDIAQMTREELRANIGMVLQDTWLFGGTIAE
NIAYGAPEGTSLDKIVEAAKATHVDRFVRTLPDGYDTVIDDEGGNVSVGEKQLITIARAFLAEPAILVLDEATSSVDTRT
EVLIQHAMAQLRTGRTSFVIAHRLSTIRDADVILVMESGSIVEQGSHDALLAAGGAYARLYAAQFAEAVAETE

Nucleotide


Download         Length: 1902 bp        

>NTDB_id=491088 KGS77_RS14265 WP_242587468.1 3285471..3287372(-) (rcrQ) [Streptomyces sp. MST-110588]
ATGGGCGGCCAGCCGACCGAGAAGTCCATGGACTTCAAGGGCTCCGGCAAGCGGCTGCTGCGCGAGATGCGGCCCGAGCG
CGGCATCATGGCGGTCGCGCTGGCGCTCGGCGCGCTGAGCGTGGCGCTGAGCGTCATCGGCCCCAAGGTCCTGGGCCACG
CCACCGACCTGATCATGGCCGGCATCGTCGGCCGGCGGCTTCCCGAGGGGATCACCAAGGCCCAGGCCGTGGCGCACCTG
CGGGACCGGGGCCAGGACGGGCTGGCCGACATGCTCGGCACGATGCCCGTCGTGCCCGGACAGGGCATCGACTTCGGCGC
GGTCGGCGTGGTGCTGCTGTGGGTGACGCTGATCTACGTCGGCGCCTCGGTCTTCGGCTTCGTCCAGGCCCGGATCGCCA
CCTTCGTCGTCCAGCGGGCCGTCTTCCGCCTGCGCGAGCGGGTGGAGCACAAGCTCTCCCGGCTGCCGCTGAGCTACTTC
GACAAGCAGCCGCGCGGCGAGGTCCTCTCCCGCGCCACCAATGACATCGACAACATCCAGCAGACCCTCCAGCAGACCCT
GAGCCAGATCGTCACCTCGCTGCTGACGATCCTGGGCGTGCTGGTGATGATGTTCTGGATCTCGCCGCTGCTGGCACTGG
TCGCGCTGGTCACCGTGCCGGTCTCGGTGGTGGTGGCCACCAAGGTCGGCAAGCGGGCGCAGCCGCAGTTCGTCCAGCAG
TGGAAGACCACCGGCAAACTCAACGCGCACATCGAGGAGATGTACACCGGCCATGCGCTGGTGAAGGTCTTCGGCCGGCA
GAAGGAGTCCGCCGCCCTCTTCCGCGAGCAGAACGAGGCGCTCTACCAGGCGGGCTTCAAGGCGCAGTTCATCTCCGGAA
TCATCCAGCCCGCGATGATGTTCATCGGCAACCTCAACTACGTGCTGGTCGCGGTGGTCGGCGGCCTGCGGGTGGCCTCC
GGCGCGCTGTCCATCGGTGACGTGCAGGCGTTCATCCAGTACTCCCGGCAGTTCAGCCAGCCGCTGACCCAGGTCGCCTC
CATGGCCAACCTGGTCCAGTCCGGTGTCGCCTCGGCCGAGCGGGTCTTCGAGCTGCTGGACGCCCCGGAGCAGGCGCCGG
AGGCGGCCGAGCCCGTACGGCCCGAGCACGTCAGGGGCCGGGTCGAGTTCGAGGAGGTGTCCTTCAGCTACCAGGCCGAC
AAGCCGCTCATCGAGAACCTGTCGCTGTCGGTACGGCCCGGCCAGACGGTCGCGATCGTCGGCCCGACGGGCGCCGGCAA
GACCACGCTGGTCAACCTCCTGATGCGCTTCTACGAGGTGGGCGGCGGCCGGATCACCCTGGACGGCGTGGACATCGCGC
AGATGACCCGCGAGGAGCTGCGCGCCAACATCGGCATGGTGCTCCAGGACACCTGGCTCTTCGGCGGCACGATCGCCGAG
AACATTGCGTACGGCGCTCCCGAGGGCACCTCGCTCGACAAGATCGTCGAGGCGGCGAAGGCCACCCACGTCGACCGCTT
CGTGCGCACCCTCCCCGACGGCTACGACACCGTCATCGACGACGAGGGCGGCAATGTCTCCGTCGGCGAGAAGCAGCTCA
TCACCATCGCGCGGGCGTTCCTGGCCGAACCGGCGATCCTGGTCCTGGACGAGGCCACCAGCTCGGTCGACACCCGTACC
GAGGTGCTGATCCAGCACGCCATGGCCCAGCTCAGGACCGGCCGTACGAGCTTCGTGATCGCCCACCGGCTGTCCACGAT
CCGCGACGCGGACGTCATCCTGGTGATGGAGTCCGGCTCGATCGTGGAACAGGGCAGCCACGACGCGCTGCTGGCGGCGG
GCGGCGCCTACGCGCGGCTGTACGCGGCACAGTTCGCGGAGGCGGTGGCCGAGACGGAGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(38-342)

ABC transporter (ABC_tran)

(405-554)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.586

97.63

0.406