Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   KGS77_RS11605 Genome accession   NZ_CP074380
Coordinates   2668713..2669810 (-) Length   365 a.a.
NCBI ID   WP_242580765.1    Uniprot ID   -
Organism   Streptomyces sp. MST-110588     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2663713..2674810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGS77_RS11585 (KGS77_11470) - 2664145..2665116 (+) 972 WP_242580762.1 ABC transporter permease -
  KGS77_RS11590 (KGS77_11475) - 2665128..2666192 (+) 1065 WP_242580763.1 ABC transporter ATP-binding protein -
  KGS77_RS11595 (KGS77_11480) - 2666205..2667368 (+) 1164 WP_242580764.1 oligopeptide/dipeptide ABC transporter ATP-binding protein -
  KGS77_RS11600 (KGS77_11485) - 2667452..2668726 (-) 1275 WP_347404470.1 dipeptide ABC transporter ATP-binding protein -
  KGS77_RS11605 (KGS77_11490) amiE 2668713..2669810 (-) 1098 WP_242580765.1 ABC transporter ATP-binding protein Regulator
  KGS77_RS11610 (KGS77_11495) - 2669822..2670790 (-) 969 WP_242580768.1 ABC transporter permease -
  KGS77_RS11615 (KGS77_11500) - 2670783..2671706 (-) 924 WP_242580770.1 ABC transporter permease -
  KGS77_RS11620 (KGS77_11505) - 2671780..2673408 (-) 1629 WP_242580772.1 ABC transporter substrate-binding protein -
  KGS77_RS11625 (KGS77_11510) - 2673877..2674761 (-) 885 WP_242580774.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 365 a.a.        Molecular weight: 39442.23 Da        Isoelectric Point: 6.8373

>NTDB_id=491079 KGS77_RS11605 WP_242580765.1 2668713..2669810(-) (amiE) [Streptomyces sp. MST-110588]
MTTQDTPDGPRTPDGPRTPGTPGTPDTPQESGSSRTPPAGLLDVRDLKVEFRTRDGVAKAVNGVSYRVAAGETLAVLGES
GSGKSVTAQAVMGILDSPPGFVTGGEIFFQGRDLLKLGAEERRKVRGAKMAMIFQDALSALNPVLSVGAQLGEMYEVHAG
LSRKEARGRAAELMDRVRIPAARQRVGDYPHQFSGGMRQRIMIAMALALEPDLIIADEPTTALDVTVQAQVMDLLAELQR
EYNMGLILITHDLGVVADVADKIAVMYAGRIMETAPVHDLYKAPAHPYTRGLLDSIPRLDRKGRDLYAIKGLPPNLTRIP
PGCEFNPRCPMAQDVCVTDRPPLYDVAHGRASACHFWKETLDAAR

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=491079 KGS77_RS11605 WP_242580765.1 2668713..2669810(-) (amiE) [Streptomyces sp. MST-110588]
ATGACGACGCAGGACACGCCGGACGGACCGCGTACGCCGGACGGACCGCGTACGCCGGGCACACCAGGTACGCCGGATAC
GCCGCAGGAATCGGGCTCGTCGCGGACGCCGCCGGCCGGGCTGCTGGACGTACGGGATCTGAAGGTGGAGTTCCGTACGC
GCGACGGGGTCGCCAAGGCCGTCAACGGCGTGAGCTACCGCGTGGCCGCCGGGGAGACGCTGGCCGTCCTGGGGGAGTCG
GGCTCGGGCAAGTCCGTCACCGCGCAGGCCGTCATGGGCATCCTGGACTCCCCGCCCGGGTTCGTCACCGGCGGGGAGAT
CTTCTTCCAGGGGCGGGACCTGCTCAAGCTCGGCGCCGAGGAGCGCCGCAAGGTGCGCGGCGCGAAGATGGCGATGATCT
TCCAGGACGCGCTCTCCGCGCTCAACCCCGTCCTGAGCGTGGGGGCGCAGCTCGGTGAGATGTACGAGGTGCACGCCGGC
CTGTCGCGCAAGGAAGCGCGCGGCAGGGCGGCCGAGCTGATGGACCGGGTCCGCATCCCGGCCGCCCGGCAGCGGGTGGG
GGACTACCCGCACCAGTTCTCCGGGGGCATGCGTCAGCGGATCATGATTGCGATGGCGCTGGCGCTGGAGCCGGATCTGA
TCATCGCGGACGAGCCGACGACGGCGCTGGACGTCACGGTGCAGGCCCAGGTGATGGATCTGCTCGCGGAGTTGCAGCGC
GAGTACAACATGGGACTCATTCTGATCACCCATGACCTGGGTGTGGTCGCGGACGTGGCCGACAAGATCGCGGTGATGTA
CGCGGGCCGGATCATGGAGACGGCTCCCGTGCACGACCTCTACAAGGCCCCGGCCCACCCGTACACCCGCGGCCTGCTGG
ACTCCATCCCGCGCCTGGACCGCAAGGGCCGGGACCTGTACGCGATCAAGGGCCTGCCGCCCAACCTCACCCGTATCCCG
CCGGGGTGCGAGTTCAACCCGCGCTGCCCGATGGCCCAGGACGTCTGCGTCACCGACCGGCCGCCGCTGTACGACGTGGC
GCACGGCCGGGCCAGCGCCTGCCACTTCTGGAAGGAGACGCTCGATGCGGCGCGGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

48.867

84.658

0.414

  amiE Streptococcus thermophilus LMG 18311

47.727

84.384

0.403

  amiE Streptococcus thermophilus LMD-9

47.727

84.384

0.403

  oppD Streptococcus mutans UA159

45.223

86.027

0.389