Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KGS77_RS08270 Genome accession   NZ_CP074380
Coordinates   1894212..1895012 (+) Length   266 a.a.
NCBI ID   WP_242579914.1    Uniprot ID   -
Organism   Streptomyces sp. MST-110588     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1889212..1900012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KGS77_RS08260 (KGS77_08170) - 1890108..1892987 (-) 2880 WP_242579909.1 vitamin B12-dependent ribonucleotide reductase -
  KGS77_RS08265 (KGS77_08175) nrdR 1893107..1893652 (-) 546 WP_242579912.1 transcriptional regulator NrdR -
  KGS77_RS08270 (KGS77_08180) dinR/lexA 1894212..1895012 (+) 801 WP_242579914.1 transcriptional repressor LexA Regulator
  KGS77_RS08275 (KGS77_08185) - 1895106..1897076 (-) 1971 WP_242579916.1 ATP-dependent DNA helicase -
  KGS77_RS08280 (KGS77_08190) - 1897248..1899088 (-) 1841 Protein_1661 IucA/IucC family protein -
  KGS77_RS08285 (KGS77_08195) - 1899276..1900001 (-) 726 WP_242579918.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 28776.57 Da        Isoelectric Point: 7.4753

>NTDB_id=491067 KGS77_RS08270 WP_242579914.1 1894212..1895012(+) (dinR/lexA) [Streptomyces sp. MST-110588]
MTTTADSATITAQSHSPSRFEHPQQAQKPPMDENTMNAEGQKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRG
YPPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSAPADTAGKPAASYVPLVGRIAAGGPIL
AEESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLP
HNAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 801 bp        

>NTDB_id=491067 KGS77_RS08270 WP_242579914.1 1894212..1895012(+) (dinR/lexA) [Streptomyces sp. MST-110588]
GTGACCACCACCGCAGACAGCGCCACCATCACCGCCCAGAGCCACTCCCCTAGCCGATTCGAGCATCCGCAGCAGGCCCA
GAAACCGCCGATGGACGAGAACACCATGAATGCCGAGGGGCAGAAGCCCGCGCGCTCGCTGCCGGGCCGGCCACCAGGAA
TCCGCGCCGACAGCTCGGGGCTCACCGACCGGCAGCGCCGGGTCATCGAGGTCATCCGGGATTCGGTCCAGCGCCGCGGC
TACCCGCCGTCCATGCGCGAGATCGGGCAGGCGGTGGGGCTGTCCAGCACCTCGTCCGTCGCCCACCAGCTCATGGCCCT
GGAGCGCAAGGGCTTCCTGCGCCGCGATCCGCACCGCCCCCGGGCGTACGAGGTCCGTGGCTCGGACCAGCCCAGCAGCG
CCCCGGCCGACACCGCGGGCAAGCCGGCCGCCTCCTACGTTCCGCTGGTCGGCCGGATCGCCGCGGGCGGTCCCATCCTC
GCCGAGGAGTCGGTGGAGGACGTCTTTCCGCTGCCCCGGCAGTTGGTCGGGGACGGCGAGCTGTTCGTCCTGAAGGTGGT
CGGCGACTCCATGATCGAGGCCGCGATCTGTGACGGCGACTGGGTGACGGTCCGCCGCCAGCCGGTGGCGGAGAACGGTG
ACATCGTGGCCGCCATGCTGGACGGCGAGGCGACGGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCG
CACAACGCGGCGTACCAGCCGATTCCCGGTGACGAGGCGACGATCCTCGGCAAGGTGGTGGCGGTTCTGCGGCGGGTCTG
A

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(148-260)

LexA DNA binding domain (LexA_DNA_bind)

(59-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

79.699

0.368