Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   MSA_RS06425 Genome accession   NC_021486
Coordinates   1206286..1206768 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae ILRI005     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1201286..1211768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MSA_RS06405 (MSA_13150) alsS 1201546..1203228 (-) 1683 WP_016480860.1 acetolactate synthase AlsS -
  MSA_RS06410 (MSA_13160) - 1203337..1204563 (-) 1227 WP_000934876.1 hypothetical protein -
  MSA_RS06415 - 1204553..1205743 (-) 1191 WP_041165686.1 AI-2E family transporter -
  MSA_RS06420 (MSA_13180) - 1205835..1206296 (-) 462 WP_016480862.1 NUDIX hydrolase -
  MSA_RS06425 (MSA_13190) mutX 1206286..1206768 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  MSA_RS06430 (MSA_13200) hylB 1206986..1209631 (+) 2646 Protein_1179 hyaluronate lyase -
  MSA_RS11225 - 1210835..1211431 (+) 597 Protein_1181 polysaccharide lyase family 8 super-sandwich domain-containing protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=49094 MSA_RS06425 WP_000163512.1 1206286..1206768(-) (mutX) [Streptococcus agalactiae ILRI005]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=49094 MSA_RS06425 WP_000163512.1 1206286..1206768(-) (mutX) [Streptococcus agalactiae ILRI005]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACGGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712

Multiple sequence alignment