Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   KE639_RS33750 Genome accession   NZ_CP074111
Coordinates   7518125..7520470 (-) Length   781 a.a.
NCBI ID   WP_212732007.1    Uniprot ID   -
Organism   Streptomyces sp. V17-9     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7513125..7525470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE639_RS33730 (KE639_06754) - 7514533..7515282 (+) 750 WP_176152905.1 succinate dehydrogenase/fumarate reductase iron-sulfur subunit -
  KE639_RS33735 (KE639_06755) - 7515489..7516262 (+) 774 WP_102928193.1 GNAT family N-acyltransferase -
  KE639_RS33740 (KE639_06756) - 7516259..7517086 (+) 828 WP_212732005.1 lysophospholipid acyltransferase family protein -
  KE639_RS33745 (KE639_06757) - 7517159..7518079 (+) 921 WP_212732006.1 PRC and DUF2382 domain-containing protein -
  KE639_RS33750 (KE639_06758) uvrA 7518125..7520470 (-) 2346 WP_212732007.1 excinuclease ABC subunit UvrA Machinery gene
  KE639_RS33755 (KE639_06759) - 7520511..7521530 (-) 1020 WP_212732008.1 LLM class flavin-dependent oxidoreductase -
  KE639_RS33760 (KE639_06760) - 7521630..7522121 (+) 492 WP_212732009.1 hypothetical protein -
  KE639_RS33765 (KE639_06761) - 7522123..7522338 (-) 216 WP_030399431.1 dodecin -
  KE639_RS33770 (KE639_06762) - 7522590..7523858 (+) 1269 WP_212732010.1 extracellular solute-binding protein -
  KE639_RS33775 (KE639_06763) egtD 7523904..7524875 (-) 972 WP_212732011.1 L-histidine N(alpha)-methyltransferase -

Sequence

Protein


Download         Length: 781 a.a.        Molecular weight: 82898.01 Da        Isoelectric Point: 7.2637

>NTDB_id=490654 KE639_RS33750 WP_212732007.1 7518125..7520470(-) (uvrA) [Streptomyces sp. V17-9]
MHSPHDPYVRVRDAREHNLKGVDVDVPRDVVAVFTGVSGSGKSSLAFGTVYAEAQRRYFESVAPYARRLIHQVGAPKVGE
ITGLPPAVSLQQRRAAPTSRSSVGTVTNLSNSLRMLFSRAGDYPPGAERLDSDAFSPNTAAGACPRCHGLGRVHRTTEEL
LVPDPSLSVRDGAIAAWPGAWQGKNLRDVLDALGYDVDRPWRELPAEAREWILFTDDQPVVTVHPVRDAGRIQRPYQGTY
MSARRYVMKTFADSKSATLRAKAERFLTSAPCPVCGGGRLRAESLAVTVGGRTVAELAALPLTELAAVLPTEGETARVLT
EDLTSRIAPVVELGLGYLSLDRPTPTLSAGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLARLKAAGNS
VFVVEHHLGVMRGADWIVDVGPLAGEHGGRVLYSGPVDGLAGVAESATARHLFGRSPAPAREVRVPRGTVTVGPVTRHNL
RGVTARFPLGVLTAVTGVSGSGKSTLVGEITEDLAGVDRLVSVDQRPIGRTPRSNLATYTGLFDVVRKVFAATDQARERG
YGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYAPCPDCGGARYNPETLEVTYRGRNIAEVLDLTVEGAAEFFAYTPA
AARSLAALLDVGLGYLRLGQPATELSGGEAQRIKLASELQRGRRGHTLYLLDEPTTGLHPADVEVLMRQLHGLVDAGHTV
VVVEHDMGVVAGADHVIDLGPGGGDAGGRIVAAGTPVEVAAAEGSATAPYLARALDDGKRR

Nucleotide


Download         Length: 2346 bp        

>NTDB_id=490654 KE639_RS33750 WP_212732007.1 7518125..7520470(-) (uvrA) [Streptomyces sp. V17-9]
ATGCACAGCCCCCACGACCCGTACGTCCGCGTGCGCGACGCCCGCGAGCACAACCTCAAGGGCGTCGACGTGGACGTCCC
CCGGGACGTGGTGGCGGTGTTCACCGGCGTCTCGGGGTCGGGGAAGTCGTCGCTGGCCTTCGGAACGGTCTACGCGGAGG
CGCAGCGGCGCTACTTCGAGTCGGTCGCGCCGTACGCCCGTCGGCTCATCCACCAGGTGGGCGCGCCGAAGGTGGGCGAG
ATCACCGGGCTGCCGCCCGCCGTGTCGTTGCAGCAGCGGCGGGCGGCCCCGACGTCCCGCTCGTCGGTGGGGACGGTCAC
CAACCTCTCCAACTCCCTGCGGATGCTCTTCTCCCGCGCGGGCGACTATCCGCCGGGCGCCGAGCGGCTGGACTCCGACG
CCTTCTCGCCGAACACCGCGGCCGGGGCCTGCCCTCGGTGCCACGGGCTCGGCCGGGTGCACCGCACCACCGAGGAGCTG
CTGGTCCCGGACCCCTCGCTGTCCGTCCGGGACGGCGCGATCGCCGCGTGGCCGGGCGCCTGGCAGGGCAAGAACCTGCG
CGACGTGCTGGACGCGCTCGGGTACGACGTGGACCGGCCCTGGCGCGAGCTGCCCGCCGAGGCGCGGGAGTGGATCCTGT
TCACCGACGACCAGCCGGTGGTCACGGTGCACCCGGTGCGGGACGCGGGGCGCATCCAGCGGCCGTACCAGGGCACGTAC
ATGAGCGCCCGGCGCTATGTGATGAAGACCTTCGCGGACTCCAAGAGCGCCACGCTGCGGGCGAAGGCGGAGCGGTTCCT
GACCAGCGCGCCCTGTCCGGTGTGCGGTGGCGGCAGACTGCGGGCCGAGTCCCTCGCGGTGACCGTCGGCGGCCGCACCG
TCGCCGAGCTGGCCGCCCTGCCGCTCACCGAGCTGGCCGCCGTGCTGCCGACGGAGGGCGAGACGGCCAGGGTGCTGACC
GAGGACCTCACCTCGCGGATCGCGCCCGTCGTCGAGCTGGGACTCGGCTATCTGAGCCTGGACCGCCCCACGCCCACCCT
GTCCGCGGGCGAGCTGCAGCGGCTGCGGCTGGCGACCCAGCTGCGCTCCGGTCTGTTCGGGGTGGTGTACGTCCTCGACG
AGCCCTCCGCGGGGCTGCACCCGGCGGACACCGAGGCGCTCCTGACGGTGCTGGCGCGGCTGAAAGCGGCCGGGAACTCG
GTGTTCGTGGTGGAGCACCACCTGGGGGTGATGCGCGGCGCCGACTGGATCGTGGACGTCGGTCCGCTGGCCGGCGAGCA
CGGCGGGCGGGTGCTGTACAGCGGCCCGGTCGACGGGCTGGCCGGGGTCGCGGAGTCAGCCACCGCCCGTCACCTCTTCG
GCCGCTCCCCCGCGCCCGCGCGCGAGGTGCGCGTGCCGCGGGGCACGGTGACGGTCGGTCCGGTGACGCGGCACAACCTG
CGCGGGGTGACCGCGCGGTTCCCGCTCGGGGTGCTCACCGCCGTGACGGGCGTGTCGGGCTCCGGGAAGTCGACGCTGGT
CGGCGAGATCACGGAGGACCTGGCGGGGGTGGACCGGCTGGTCTCCGTCGACCAGCGGCCGATCGGCCGCACCCCGCGCT
CCAACCTGGCGACCTACACGGGACTGTTCGACGTCGTGCGCAAGGTCTTCGCCGCCACCGACCAGGCGCGGGAACGCGGT
TACGGCGTGGGCCGGTTCTCCTTCAACGTGGCGGGCGGGCGCTGCGAGACCTGCCAGGGCGAGGGTTTCGTCAGCGTCGA
GCTGCTGTTCCTGCCGAGCACGTACGCTCCGTGCCCCGACTGCGGCGGGGCCCGCTACAACCCCGAGACGCTCGAAGTGA
CGTACCGGGGGCGGAACATCGCCGAGGTGCTGGACCTGACCGTGGAGGGCGCGGCGGAGTTCTTCGCGTACACCCCGGCG
GCGGCCCGCAGTCTGGCCGCGTTGCTGGACGTCGGTCTCGGCTATCTGCGGCTCGGCCAGCCGGCGACGGAGCTGTCCGG
CGGGGAGGCGCAGCGCATCAAGCTGGCGAGCGAGTTGCAGCGCGGGCGGCGCGGTCACACCCTGTACCTGCTCGACGAGC
CGACGACCGGCCTGCACCCGGCCGATGTCGAGGTGCTGATGCGGCAGTTGCACGGTCTCGTCGACGCCGGGCACACGGTG
GTCGTGGTCGAGCACGACATGGGTGTGGTGGCCGGCGCCGACCACGTGATCGACCTGGGTCCCGGCGGCGGCGACGCGGG
CGGCCGGATCGTGGCCGCGGGAACGCCCGTCGAGGTGGCGGCCGCCGAGGGGAGCGCCACCGCTCCCTATCTGGCCCGGG
CCCTGGACGACGGGAAGCGCCGGTGA

Domains

Predicted by InterProScan.

UvrA DNA-binding domain (UvrA_DNA-bind)

(159-265)

ABC transporter (ABC_tran)

(481-695)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

43.152

86.94

0.375
  uvrA Streptococcus pneumoniae TIGR4

43.152

86.94

0.375
  uvrA Streptococcus pneumoniae D39

43.152

86.94

0.375