Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   KE639_RS31795 Genome accession   NZ_CP074111
Coordinates   7038280..7040538 (-) Length   752 a.a.
NCBI ID   WP_212731863.1    Uniprot ID   -
Organism   Streptomyces sp. V17-9     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7033280..7045538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE639_RS31770 (KE639_06356) - 7033871..7034923 (+) 1053 WP_212731861.1 LacI family DNA-binding transcriptional regulator -
  KE639_RS31775 (KE639_06357) - 7034944..7035729 (-) 786 WP_212731862.1 VOC family protein -
  KE639_RS31780 (KE639_06358) - 7035921..7036166 (+) 246 WP_102930666.1 WhiB family transcriptional regulator -
  KE639_RS31785 (KE639_06359) - 7036217..7037191 (-) 975 WP_102930662.1 acyl-ACP desaturase -
  KE639_RS31790 (KE639_06360) ddaH 7037399..7038175 (-) 777 WP_102930663.1 dimethylargininase -
  KE639_RS31795 (KE639_06361) uvrA 7038280..7040538 (-) 2259 WP_212731863.1 excinuclease ABC subunit UvrA Machinery gene
  KE639_RS31800 (KE639_06362) - 7040549..7042183 (-) 1635 WP_212731864.1 ATP-binding cassette domain-containing protein -
  KE639_RS31805 (KE639_06363) - 7042508..7043185 (+) 678 WP_212731865.1 GPP34 family phosphoprotein -
  KE639_RS31810 (KE639_06364) - 7043289..7043705 (-) 417 WP_102927721.1 SsgA family sporulation/cell division regulator -
  KE639_RS31815 (KE639_06365) - 7044044..7045090 (+) 1047 WP_212732571.1 oxidoreductase -
  KE639_RS31820 (KE639_06366) - 7045174..7045503 (+) 330 WP_102929073.1 plasmid stabilization protein -

Sequence

Protein


Download         Length: 752 a.a.        Molecular weight: 80479.04 Da        Isoelectric Point: 6.9841

>NTDB_id=490652 KE639_RS31795 WP_212731863.1 7038280..7040538(-) (uvrA) [Streptomyces sp. V17-9]
MSEFISITGARENNLQDVTLRIPKGRLTVFTGVSGSGKSSVVFDTIAVESRRQLNETFTWFVRNRLPKYERPHADALEDL
TPAIVVDQRPVGGHSRSTVGTMTDIHSVLRVLFSRHGTPGAGGATAYSFNDPSGMCPGCDGLGRRVQPDWDRILDPARSL
ADGAVRFPPFAAGTWQGQAYTNTQELDTGKPVGDFTDAERAFLMRGRPGSKVTVSGSGGTWSTDYEGLADRFERLYLKRD
LSGMSEKTRNLVRGFLVEARCPDCGGARLNAAALASRIGGRSIADCSRMQITDLIAVLREIDDPVALPVAAAAVAALERV
EAIGLGYLSLDRETATLSGGEGQRLKTVRHLGSSLTGMTYIFDEPSVGLHPRDVGRLGDLLLRLRDKGNTVLVVEHDPDV
IALADHVVDMGPRAGADGGRVVFEGTPDRLAASDTLTGRCLGRRTAVKETVRTPTGELWVKGADRHNLREVTVAFATGVL
TAVTGVAGSGKSTLVAELTAAHPDAVVVDQSAIGISARSTPATYLGIMDTVRKLFARETGAEPGFFSFNSAGACGTCEGR
GIIHTDLAFMDPVTTTCHDCEGRRFREEVLRLTVDGRSVADVLAMTADQALGFFADTGVRRRLHALRDVGLTYLTLGQPL
STLSGGERQRIKLATRLHRTGAVYVLDEPTTGLHMSDVQGLLALLDRLVDSGNTVVVVEHNLDVVAHADRVIDLGPDGGR
DGGRVIFEGTPRELLAARGSSTAEHLRRATRG

Nucleotide


Download         Length: 2259 bp        

>NTDB_id=490652 KE639_RS31795 WP_212731863.1 7038280..7040538(-) (uvrA) [Streptomyces sp. V17-9]
ATGAGCGAATTCATCAGCATCACCGGGGCCAGGGAGAACAACCTCCAGGACGTCACGCTCCGCATCCCGAAGGGCCGGCT
GACCGTGTTCACCGGCGTTTCGGGGTCGGGGAAGTCGTCGGTCGTGTTCGACACGATCGCGGTGGAGTCGCGGCGCCAGC
TGAACGAGACGTTCACCTGGTTCGTGCGCAACCGGCTGCCCAAGTACGAGCGGCCGCACGCGGACGCCCTGGAGGATCTG
ACCCCCGCCATCGTCGTCGACCAGCGGCCGGTCGGCGGCCACTCCCGCTCCACGGTCGGCACGATGACCGACATCCACTC
CGTGCTGCGGGTGCTGTTCTCCCGGCACGGCACCCCCGGTGCGGGAGGGGCGACGGCGTACTCCTTCAACGACCCGTCGG
GCATGTGCCCCGGCTGCGACGGCCTGGGCCGCAGGGTGCAGCCCGACTGGGACCGGATCCTCGACCCGGCGAGGTCGCTG
GCGGACGGGGCGGTGCGCTTCCCGCCGTTCGCGGCCGGGACCTGGCAGGGGCAGGCGTACACCAATACGCAGGAGCTGGA
CACCGGCAAGCCGGTCGGCGACTTCACGGACGCCGAGCGCGCCTTCCTGATGCGCGGGCGGCCCGGCAGCAAGGTCACCG
TCAGCGGCTCGGGCGGGACGTGGAGCACCGACTACGAGGGCCTCGCCGACCGGTTCGAACGGCTGTACCTCAAGCGGGAC
CTGTCCGGCATGAGCGAGAAGACCCGGAACCTGGTGCGCGGCTTCCTGGTCGAGGCCCGCTGCCCCGACTGCGGCGGCGC
CCGGCTGAACGCGGCCGCGCTCGCCTCCCGGATCGGCGGGCGCTCCATCGCCGACTGCTCGCGGATGCAGATCACCGACC
TGATCGCCGTGCTGCGGGAGATCGACGACCCGGTGGCCCTGCCGGTGGCGGCCGCCGCGGTGGCCGCGCTGGAGCGGGTG
GAGGCCATCGGCCTCGGCTATCTCAGCCTGGACCGGGAGACCGCCACCCTCTCCGGCGGCGAGGGGCAGCGGCTGAAGAC
CGTGCGGCACCTCGGGTCCAGCCTGACCGGGATGACGTACATCTTCGACGAGCCCAGCGTCGGGCTGCACCCGCGTGACG
TGGGACGTCTCGGCGACCTGCTGCTGCGGCTGCGCGACAAGGGCAACACCGTGCTGGTGGTCGAGCACGACCCGGACGTC
ATCGCGCTGGCGGACCACGTCGTCGACATGGGGCCGCGGGCCGGCGCGGACGGCGGCCGGGTGGTGTTCGAGGGGACGCC
GGACCGGCTGGCCGCCTCGGACACGCTCACCGGGCGGTGCCTGGGACGGCGTACGGCGGTGAAGGAGACCGTGCGCACAC
CCACCGGCGAGCTGTGGGTCAAGGGCGCCGACCGGCACAACCTGCGGGAGGTGACGGTGGCGTTCGCGACCGGGGTGCTC
ACCGCGGTCACCGGGGTCGCCGGGTCGGGCAAGAGCACGCTGGTCGCGGAGCTGACCGCCGCCCACCCGGACGCCGTGGT
CGTCGACCAGTCGGCCATCGGCATCTCGGCCCGCTCCACCCCGGCGACGTACCTCGGGATCATGGACACGGTGCGGAAGC
TCTTCGCCCGGGAGACCGGTGCCGAGCCGGGGTTCTTCAGCTTCAACTCGGCGGGGGCGTGCGGCACCTGTGAGGGACGC
GGGATCATCCACACCGACCTCGCCTTCATGGACCCGGTGACGACCACCTGCCACGACTGCGAGGGGCGCCGCTTCCGGGA
GGAGGTGCTGCGTCTGACGGTCGACGGCCGGTCCGTCGCCGATGTGCTCGCGATGACCGCCGACCAGGCCCTCGGCTTCT
TCGCCGACACCGGCGTACGCCGCAGGCTGCACGCCCTGCGCGACGTCGGCCTCACCTACCTCACCCTCGGTCAGCCGCTG
TCCACGCTCTCCGGCGGCGAGCGGCAGCGCATCAAACTGGCCACCCGGCTGCACCGCACCGGCGCGGTGTACGTCCTGGA
CGAGCCGACCACCGGACTCCACATGTCGGACGTCCAGGGCCTGCTCGCCCTGCTGGACCGGCTGGTGGACAGCGGCAACA
CGGTCGTGGTCGTCGAGCACAACCTGGACGTGGTGGCGCACGCCGACCGGGTGATCGACCTCGGTCCGGACGGCGGACGG
GACGGCGGCCGGGTGATCTTCGAGGGCACCCCGCGCGAGCTGCTCGCGGCCCGCGGCTCCAGCACCGCGGAGCATCTCAG
GAGGGCTACGAGGGGCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(468-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

38.913

92.952

0.362
  uvrA Streptococcus pneumoniae TIGR4

38.913

92.952

0.362
  uvrA Streptococcus pneumoniae D39

38.913

92.952

0.362